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Cluster: HRGMv2_2393_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2393_98 HRGMv2_2393_98_9 10345 11637 + 3.A.1.1.44
TC HRGMv2_2393_98 HRGMv2_2393_98_10 11649 12545 + 3.A.1.1.25
TC HRGMv2_2393_98 HRGMv2_2393_98_11 12559 13395 + 3.A.1.1.34
CAZyme HRGMv2_2393_98 HRGMv2_2393_98_12 13420 15615 + GH36
pfam HRGMv2_2393_98 HRGMv2_2393_98_13 15630 16097 + DUF6106
CAZyme HRGMv2_2393_98 HRGMv2_2393_98_14 16099 17931 + GH13_4
TC HRGMv2_2393_98 HRGMv2_2393_98_15 17988 19100 + 3.A.1.1.26
Gene ID: HRGMv2_2393_98_9
Type: TC
Location: 10345 - 11637 (+)
Gene ID: HRGMv2_2393_98_10
Type: TC
Location: 11649 - 12545 (+)
Gene ID: HRGMv2_2393_98_11
Type: TC
Location: 12559 - 13395 (+)
Gene ID: HRGMv2_2393_98_12
Type: CAZyme
Location: 13420 - 15615 (+)
Gene ID: HRGMv2_2393_98_13
Type: pfam
Location: 15630 - 16097 (+)
Gene ID: HRGMv2_2393_98_14
Type: CAZyme
Location: 16099 - 17931 (+)
Gene ID: HRGMv2_2393_98_15
Type: TC
Location: 17988 - 19100 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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