Cluster: HRGMv2_2393_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2393
- CGC Family ID: CGCFAM_00073
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2393_102 | HRGMv2_2393_102_48 | 50316 | 51488 | - | GT4 |
| TC | HRGMv2_2393_102 | HRGMv2_2393_102_49 | 51750 | 53132 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2393_102 | HRGMv2_2393_102_50 | 53144 | 54229 | + | GT4 |
| TC | HRGMv2_2393_102 | HRGMv2_2393_102_51 | 54213 | 55019 | + | 3.A.1.103.6 |
| TC | HRGMv2_2393_102 | HRGMv2_2393_102_52 | 55031 | 55762 | + | 3.A.1.103.5 |
| CAZyme | HRGMv2_2393_102 | HRGMv2_2393_102_53 | 55774 | 56910 | + | GT4 |
| CAZyme | HRGMv2_2393_102 | HRGMv2_2393_102_54 | 56914 | 58071 | + | GT4 |
Gene ID: HRGMv2_2393_102_48
Type: CAZyme
Location: 50316 - 51488 (-)
Type: CAZyme
Location: 50316 - 51488 (-)
Gene ID: HRGMv2_2393_102_49
Type: TC
Location: 51750 - 53132 (+)
Type: TC
Location: 51750 - 53132 (+)
Gene ID: HRGMv2_2393_102_50
Type: CAZyme
Location: 53144 - 54229 (+)
Type: CAZyme
Location: 53144 - 54229 (+)
Gene ID: HRGMv2_2393_102_51
Type: TC
Location: 54213 - 55019 (+)
Type: TC
Location: 54213 - 55019 (+)
Gene ID: HRGMv2_2393_102_52
Type: TC
Location: 55031 - 55762 (+)
Type: TC
Location: 55031 - 55762 (+)
Gene ID: HRGMv2_2393_102_53
Type: CAZyme
Location: 55774 - 56910 (+)
Type: CAZyme
Location: 55774 - 56910 (+)
Gene ID: HRGMv2_2393_102_54
Type: CAZyme
Location: 56914 - 58071 (+)
Type: CAZyme
Location: 56914 - 58071 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A sp002160755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.