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Cluster: HRGMv2_2393_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2393_52 HRGMv2_2393_52_10 9232 10668 - GH165
pfam HRGMv2_2393_52 HRGMv2_2393_52_11 10750 11667 - DHDPS
pfam HRGMv2_2393_52 HRGMv2_2393_52_12 11729 12178 - DUF386
TC HRGMv2_2393_52 HRGMv2_2393_52_13 12175 13185 - 3.A.1.5.20
TC HRGMv2_2393_52 HRGMv2_2393_52_14 13186 14214 - 3.A.1.5.12
TC HRGMv2_2393_52 HRGMv2_2393_52_15 14225 15118 - 3.A.1.5.20
TC HRGMv2_2393_52 HRGMv2_2393_52_16 15138 16097 - 3.A.1.5.20
TC HRGMv2_2393_52 HRGMv2_2393_52_17 16168 17781 - 3.A.1.5.28
Gene ID: HRGMv2_2393_52_10
Type: CAZyme
Location: 9232 - 10668 (-)
Gene ID: HRGMv2_2393_52_11
Type: pfam
Location: 10750 - 11667 (-)
Gene ID: HRGMv2_2393_52_12
Type: pfam
Location: 11729 - 12178 (-)
Gene ID: HRGMv2_2393_52_13
Type: TC
Location: 12175 - 13185 (-)
Gene ID: HRGMv2_2393_52_14
Type: TC
Location: 13186 - 14214 (-)
Gene ID: HRGMv2_2393_52_15
Type: TC
Location: 14225 - 15118 (-)
Gene ID: HRGMv2_2393_52_16
Type: TC
Location: 15138 - 16097 (-)
Gene ID: HRGMv2_2393_52_17
Type: TC
Location: 16168 - 17781 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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