Cluster: HRGMv2_2393_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_2393
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2393_6 | HRGMv2_2393_6_7 | 7876 | 9342 | - | GH1 |
| TC | HRGMv2_2393_6 | HRGMv2_2393_6_8 | 9339 | 10739 | - | 4.A.1.2.11 |
| TC | HRGMv2_2393_6 | HRGMv2_2393_6_9 | 10946 | 11413 | - | 4.A.1.2.5 |
| pfam | HRGMv2_2393_6 | HRGMv2_2393_6_10 | 11414 | 12241 | - | PRD | PRD | CAT_RBD |
| TC | HRGMv2_2393_6 | HRGMv2_2393_6_11 | 12713 | 13909 | - | 2.A.26.1.9 |
| TC | HRGMv2_2393_6 | HRGMv2_2393_6_12 | 14126 | 15760 | + | 2.A.58.2.2 |
Gene ID: HRGMv2_2393_6_7
Type: CAZyme
Location: 7876 - 9342 (-)
Type: CAZyme
Location: 7876 - 9342 (-)
Gene ID: HRGMv2_2393_6_8
Type: TC
Location: 9339 - 10739 (-)
Type: TC
Location: 9339 - 10739 (-)
Gene ID: HRGMv2_2393_6_9
Type: TC
Location: 10946 - 11413 (-)
Type: TC
Location: 10946 - 11413 (-)
Gene ID: HRGMv2_2393_6_10
Type: pfam
Location: 11414 - 12241 (-)
Type: pfam
Location: 11414 - 12241 (-)
Gene ID: HRGMv2_2393_6_11
Type: TC
Location: 12713 - 13909 (-)
Type: TC
Location: 12713 - 13909 (-)
Gene ID: HRGMv2_2393_6_12
Type: TC
Location: 14126 - 15760 (+)
Type: TC
Location: 14126 - 15760 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A sp002160755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.