Cluster: HRGMv2_2393_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2393
- CGC Family ID: CGCFAM_03809
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2393_32 | HRGMv2_2393_32_8 | 9482 | 10906 | + | 2.A.118.1.5 |
| pfam | HRGMv2_2393_32 | HRGMv2_2393_32_9 | 11037 | 11975 | - | AA_kinase |
| peptidase | HRGMv2_2393_32 | HRGMv2_2393_32_10 | 12098 | 12901 | + | G05.UPW |
| CAZyme | HRGMv2_2393_32 | HRGMv2_2393_32_11 | 12915 | 13934 | + | GT2 |
| TC | HRGMv2_2393_32 | HRGMv2_2393_32_12 | 14125 | 14382 | + | 8.A.8.1.1 |
| TC | HRGMv2_2393_32 | HRGMv2_2393_32_13 | 14533 | 16188 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_2393_32_8
Type: TC
Location: 9482 - 10906 (+)
Type: TC
Location: 9482 - 10906 (+)
Gene ID: HRGMv2_2393_32_9
Type: pfam
Location: 11037 - 11975 (-)
Type: pfam
Location: 11037 - 11975 (-)
Gene ID: HRGMv2_2393_32_10
Type: peptidase
Location: 12098 - 12901 (+)
Type: peptidase
Location: 12098 - 12901 (+)
Gene ID: HRGMv2_2393_32_11
Type: CAZyme
Location: 12915 - 13934 (+)
Type: CAZyme
Location: 12915 - 13934 (+)
Gene ID: HRGMv2_2393_32_12
Type: TC
Location: 14125 - 14382 (+)
Type: TC
Location: 14125 - 14382 (+)
Gene ID: HRGMv2_2393_32_13
Type: TC
Location: 14533 - 16188 (+)
Type: TC
Location: 14533 - 16188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A sp002160755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.