Genome Details
Selected Rep_genome_ID: HRGMv2_2390
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2390 | 3,219,575 | 98.83% | 0.584% | Malaysia | Asia | HRGM |
| MGYG000001018 | 2,841,260 | 91.4% | 0.84% | Sweden | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2390_CGC16 | CGCFAM_00005 | Yes | 7 | 2 | |
| HRGMv2_2390_CGC10 | CGCFAM_00035 | Yes | 5 | 2 | fructan |
| HRGMv2_2390_CGC18 | CGCFAM_00046 | Yes | 4 | 1 | |
| HRGMv2_2390_CGC29 | CGCFAM_00073 | Yes | 5 | 3 | |
| HRGMv2_2390_CGC11 | CGCFAM_00130 | Yes | 3 | 1 | |
| HRGMv2_2390_CGC31 | CGCFAM_00156 | Yes | 5 | 1 | |
| HRGMv2_2390_CGC34 | CGCFAM_00199 | Yes | 7 | 2 | |
| HRGMv2_2390_CGC36 | CGCFAM_00506 | Yes | 5 | 1 | |
| HRGMv2_2390_CGC26 | CGCFAM_01755 | Yes | 3 | 1 | |
| HRGMv2_2390_CGC3 | CGCFAM_02985 | Yes | 5 | 1 | |
| HRGMv2_2390_CGC35 | CGCFAM_03669 | Yes | 3 | 1 | |
| HRGMv2_2390_CGC2 | CGCFAM_03894 | Yes | 6 | 1 | |
| HRGMv2_2390_CGC32 | CGCFAM_06120 | Yes | 3 | 1 | |
| HRGMv2_2390_CGC7 | CGCFAM_08930 | Yes | 4 | 2 | |
| HRGMv2_2390_CGC1 | CGCFAM_08931 | Yes | 10 | 1 | |
| HRGMv2_2390_CGC14 | CGCFAM_08932 | Yes | 7 | 1 |
Top CAZyme Families