Cluster: HRGMv2_2390_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- CGC Family ID: CGCFAM_08932
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_8 | HRGMv2_2390_8_13 | 16655 | 17314 | + | 1.C.113.1.3 |
| STP | HRGMv2_2390_8 | HRGMv2_2390_8_14 | 17437 | 17919 | - | NUDIX |
| TC | HRGMv2_2390_8 | HRGMv2_2390_8_15 | 17937 | 19706 | - | 3.A.1.135.5 |
| TC | HRGMv2_2390_8 | HRGMv2_2390_8_16 | 19699 | 21429 | - | 3.A.1.135.7 |
| peptidase | HRGMv2_2390_8 | HRGMv2_2390_8_17 | 21571 | 23331 | - | S08.UPA |
| pfam | HRGMv2_2390_8 | HRGMv2_2390_8_18 | 23508 | 24107 | - | Rubrerythrin | RUBY_RBDX |
| CAZyme | HRGMv2_2390_8 | HRGMv2_2390_8_19 | 24206 | 25222 | - | GT2 |
Gene ID: HRGMv2_2390_8_13
Type: TC
Location: 16655 - 17314 (+)
Type: TC
Location: 16655 - 17314 (+)
Gene ID: HRGMv2_2390_8_14
Type: STP
Location: 17437 - 17919 (-)
Type: STP
Location: 17437 - 17919 (-)
Gene ID: HRGMv2_2390_8_15
Type: TC
Location: 17937 - 19706 (-)
Type: TC
Location: 17937 - 19706 (-)
Gene ID: HRGMv2_2390_8_16
Type: TC
Location: 19699 - 21429 (-)
Type: TC
Location: 19699 - 21429 (-)
Gene ID: HRGMv2_2390_8_17
Type: peptidase
Location: 21571 - 23331 (-)
Type: peptidase
Location: 21571 - 23331 (-)
Gene ID: HRGMv2_2390_8_18
Type: pfam
Location: 23508 - 24107 (-)
Type: pfam
Location: 23508 - 24107 (-)
Gene ID: HRGMv2_2390_8_19
Type: CAZyme
Location: 24206 - 25222 (-)
Type: CAZyme
Location: 24206 - 25222 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.