Cluster: HRGMv2_2390_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- CGC Family ID: CGCFAM_02985
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_1 | HRGMv2_2390_1_146 | 157451 | 158215 | + | 3.A.1.134.4 |
| TC | HRGMv2_2390_1 | HRGMv2_2390_1_147 | 158212 | 160242 | + | 3.A.1.134.9 |
| TC | HRGMv2_2390_1 | HRGMv2_2390_1_148 | 160324 | 160959 | + | 2.A.115.2.14 |
| pfam | HRGMv2_2390_1 | HRGMv2_2390_1_149 | 160988 | 161596 | - | G3P_acyltransf |
| CAZyme | HRGMv2_2390_1 | HRGMv2_2390_1_150 | 161616 | 162728 | - | GT28 |
Gene ID: HRGMv2_2390_1_146
Type: TC
Location: 157451 - 158215 (+)
Type: TC
Location: 157451 - 158215 (+)
Gene ID: HRGMv2_2390_1_147
Type: TC
Location: 158212 - 160242 (+)
Type: TC
Location: 158212 - 160242 (+)
Gene ID: HRGMv2_2390_1_148
Type: TC
Location: 160324 - 160959 (+)
Type: TC
Location: 160324 - 160959 (+)
Gene ID: HRGMv2_2390_1_149
Type: pfam
Location: 160988 - 161596 (-)
Type: pfam
Location: 160988 - 161596 (-)
Gene ID: HRGMv2_2390_1_150
Type: CAZyme
Location: 161616 - 162728 (-)
Type: CAZyme
Location: 161616 - 162728 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.