Cluster: HRGMv2_2390_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- CGC Family ID: CGCFAM_00156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_37 | HRGMv2_2390_37_3 | 1710 | 3524 | - | 3.A.1.120.6 |
| TC | HRGMv2_2390_37 | HRGMv2_2390_37_4 | 3910 | 5187 | + | 2.A.1.21.23 |
| TC | HRGMv2_2390_37 | HRGMv2_2390_37_5 | 5367 | 6431 | - | 4.D.2.1.5 |
| NULL(UNKNOWN) | HRGMv2_2390_37 | HRGMv2_2390_37_6 | 6421 | 7053 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2390_37 | HRGMv2_2390_37_7 | 7072 | 8109 | - | GT2 |
Gene ID: HRGMv2_2390_37_3
Type: TC
Location: 1710 - 3524 (-)
Type: TC
Location: 1710 - 3524 (-)
Gene ID: HRGMv2_2390_37_4
Type: TC
Location: 3910 - 5187 (+)
Type: TC
Location: 3910 - 5187 (+)
Gene ID: HRGMv2_2390_37_5
Type: TC
Location: 5367 - 6431 (-)
Type: TC
Location: 5367 - 6431 (-)
Gene ID: HRGMv2_2390_37_6
Type:
Location: 6421 - 7053 (-)
Type:
Location: 6421 - 7053 (-)
Gene ID: HRGMv2_2390_37_7
Type: CAZyme
Location: 7072 - 8109 (-)
Type: CAZyme
Location: 7072 - 8109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.