Cluster: HRGMv2_2390_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- CGC Family ID: CGCFAM_00506
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2390_60 | HRGMv2_2390_60_2 | 918 | 2033 | + | CE9 |
| pfam | HRGMv2_2390_60 | HRGMv2_2390_60_3 | 2236 | 3072 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_2390_60 | HRGMv2_2390_60_4 | 3081 | 3563 | + | 4.A.1.2.11 |
| TC | HRGMv2_2390_60 | HRGMv2_2390_60_5 | 3643 | 5112 | + | 4.A.1.1.7 |
| TC | HRGMv2_2390_60 | HRGMv2_2390_60_6 | 5255 | 6007 | + | 9.B.158.1.1 |
Gene ID: HRGMv2_2390_60_2
Type: CAZyme
Location: 918 - 2033 (+)
Type: CAZyme
Location: 918 - 2033 (+)
Gene ID: HRGMv2_2390_60_3
Type: pfam
Location: 2236 - 3072 (+)
Type: pfam
Location: 2236 - 3072 (+)
Gene ID: HRGMv2_2390_60_4
Type: TC
Location: 3081 - 3563 (+)
Type: TC
Location: 3081 - 3563 (+)
Gene ID: HRGMv2_2390_60_5
Type: TC
Location: 3643 - 5112 (+)
Type: TC
Location: 3643 - 5112 (+)
Gene ID: HRGMv2_2390_60_6
Type: TC
Location: 5255 - 6007 (+)
Type: TC
Location: 5255 - 6007 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.