Cluster: HRGMv2_2390_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2390
- CGC Family ID: CGCFAM_08930
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_2 | HRGMv2_2390_2_119 | 151844 | 152995 | + | 2.A.86.1.3 |
| pfam | HRGMv2_2390_2 | HRGMv2_2390_2_120 | 153125 | 153286 | + | Rubredoxin |
| CAZyme | HRGMv2_2390_2 | HRGMv2_2390_2_121 | 153545 | 159685 | + | CBM32 | GH101 |
| CAZyme | HRGMv2_2390_2 | HRGMv2_2390_2_122 | 159939 | 163415 | + | CBM32 | GH84 |
Gene ID: HRGMv2_2390_2_119
Type: TC
Location: 151844 - 152995 (+)
Type: TC
Location: 151844 - 152995 (+)
Gene ID: HRGMv2_2390_2_120
Type: pfam
Location: 153125 - 153286 (+)
Type: pfam
Location: 153125 - 153286 (+)
Gene ID: HRGMv2_2390_2_121
Type: CAZyme
Location: 153545 - 159685 (+)
Type: CAZyme
Location: 153545 - 159685 (+)
Gene ID: HRGMv2_2390_2_122
Type: CAZyme
Location: 159939 - 163415 (+)
Type: CAZyme
Location: 159939 - 163415 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.