Genome Details
Selected Rep_genome_ID: HRGMv2_0438
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905197435
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0438 | 3,693,472 | 97.95% | 0% | Cameroon | Africa | HRGM |
| KY102_maxbin.010 | 4,927,248 | 98.51% | 0.56% | NA | Africa | H3AfricaPhase2 |
| MGYG000001977 | 4,322,077 | 95.78% | 3.42% | Denmark | Europe | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_J_6_2308.262 | 3,848,487 | 92.87% | 0.59% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0438_CGC32 | CGCFAM_01426 | Yes | 8 | 1 | |
| HRGMv2_0438_CGC1 | CGCFAM_01493 | Yes | 18 | 7 | |
| HRGMv2_0438_CGC23 | CGCFAM_01503 | Yes | 10 | 6 | |
| HRGMv2_0438_CGC2 | CGCFAM_02995 | Yes | 7 | 2 | |
| HRGMv2_0438_CGC51 | CGCFAM_02998 | Yes | 10 | 2 | |
| HRGMv2_0438_CGC27 | CGCFAM_02999 | Yes | 8 | 1 | |
| PUL0333_HRGMv2_0438_C0 | CGCFAM_04175 | Yes | 18 | 2 | beta-glucan |
| HRGMv2_0438_CGC28 | CGCFAM_04252 | Yes | 8 | 3 | |
| HRGMv2_0438_CGC5 | CGCFAM_05469 | Yes | 11 | 6 | |
| HRGMv2_0438_CGC35 | CGCFAM_09687 | Yes | 19 | 1 |
Top CAZyme Families