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Cluster: HRGMv2_0438_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0438_19 HRGMv2_0438_19_12 16394 17524 + GT1
peptidase HRGMv2_0438_19 HRGMv2_0438_19_13 17628 19751 - S09.UPC
TC HRGMv2_0438_19 HRGMv2_0438_19_14 19896 21227 - 2.A.66.1.28
TC HRGMv2_0438_19 HRGMv2_0438_19_15 21368 23212 - 2.A.9.3.4
peptidase HRGMv2_0438_19 HRGMv2_0438_19_16 23226 24854 - C26.964
NULL(UNKNOWN) HRGMv2_0438_19 HRGMv2_0438_19_17 24895 25125 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0438_19 HRGMv2_0438_19_18 25132 26571 + 9.B.168.1.2
pfam HRGMv2_0438_19 HRGMv2_0438_19_19 26802 27221 + RseC_MucC
TC HRGMv2_0438_19 HRGMv2_0438_19_20 27256 28158 + 3.D.6.1.2
TC HRGMv2_0438_19 HRGMv2_0438_19_21 28219 29556 + 3.D.6.1.2
TC HRGMv2_0438_19 HRGMv2_0438_19_22 29564 30556 + 3.D.6.1.2
TC HRGMv2_0438_19 HRGMv2_0438_19_23 30553 31218 + 3.D.6.1.2
TC HRGMv2_0438_19 HRGMv2_0438_19_24 31235 31819 + 3.D.6.1.2
TC HRGMv2_0438_19 HRGMv2_0438_19_25 31860 32438 + 3.D.6.1.2
pfam HRGMv2_0438_19 HRGMv2_0438_19_26 32570 33604 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
TC HRGMv2_0438_19 HRGMv2_0438_19_27 34201 35733 + 3.A.2.1.7
pfam HRGMv2_0438_19 HRGMv2_0438_19_28 35746 35994 + ATP-synt_DE_N
NULL(UNKNOWN) HRGMv2_0438_19 HRGMv2_0438_19_29 36020 36439 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0438_19 HRGMv2_0438_19_30 36423 37493 + 3.A.2.1.7
Gene ID: HRGMv2_0438_19_12
Type: CAZyme
Location: 16394 - 17524 (+)
Gene ID: HRGMv2_0438_19_13
Type: peptidase
Location: 17628 - 19751 (-)
Gene ID: HRGMv2_0438_19_14
Type: TC
Location: 19896 - 21227 (-)
Gene ID: HRGMv2_0438_19_15
Type: TC
Location: 21368 - 23212 (-)
Gene ID: HRGMv2_0438_19_16
Type: peptidase
Location: 23226 - 24854 (-)
Gene ID: HRGMv2_0438_19_17
Type:
Location: 24895 - 25125 (+)
Gene ID: HRGMv2_0438_19_18
Type: TC
Location: 25132 - 26571 (+)
Gene ID: HRGMv2_0438_19_19
Type: pfam
Location: 26802 - 27221 (+)
Gene ID: HRGMv2_0438_19_20
Type: TC
Location: 27256 - 28158 (+)
Gene ID: HRGMv2_0438_19_21
Type: TC
Location: 28219 - 29556 (+)
Gene ID: HRGMv2_0438_19_22
Type: TC
Location: 29564 - 30556 (+)
Gene ID: HRGMv2_0438_19_23
Type: TC
Location: 30553 - 31218 (+)
Gene ID: HRGMv2_0438_19_24
Type: TC
Location: 31235 - 31819 (+)
Gene ID: HRGMv2_0438_19_25
Type: TC
Location: 31860 - 32438 (+)
Gene ID: HRGMv2_0438_19_26
Type: pfam
Location: 32570 - 33604 (+)
Gene ID: HRGMv2_0438_19_27
Type: TC
Location: 34201 - 35733 (+)
Gene ID: HRGMv2_0438_19_28
Type: pfam
Location: 35746 - 35994 (+)
Gene ID: HRGMv2_0438_19_29
Type:
Location: 36020 - 36439 (+)
Gene ID: HRGMv2_0438_19_30
Type: TC
Location: 36423 - 37493 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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