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Cluster: HRGMv2_0438_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0438_2 HRGMv2_0438_2_60 88236 91226 + GH55_3
CAZyme HRGMv2_0438_2 HRGMv2_0438_2_61 91333 94017 + CBM57 | GH2
CAZyme HRGMv2_0438_2 HRGMv2_0438_2_62 94118 96499 + GH88 | PL38
CAZyme HRGMv2_0438_2 HRGMv2_0438_2_63 96520 98979 + GH2
pfam HRGMv2_0438_2 HRGMv2_0438_2_64 99119 99928 + adh_short | Epimerase | KR | adh_short_C2
pfam HRGMv2_0438_2 HRGMv2_0438_2_65 99994 101238 + AP_endonuc_2 | UxuA
TC HRGMv2_0438_2 HRGMv2_0438_2_66 101373 102059 - 1.A.8.3.1
pfam HRGMv2_0438_2 HRGMv2_0438_2_67 102188 103906 - DNA_methylase
pfam HRGMv2_0438_2 HRGMv2_0438_2_68 103909 105339 - MutH | MutH
CAZyme HRGMv2_0438_2 HRGMv2_0438_2_69 105600 107825 - GH3
CAZyme HRGMv2_0438_2 HRGMv2_0438_2_70 107899 109149 - GH5_46
Gene ID: HRGMv2_0438_2_60
Type: CAZyme
Location: 88236 - 91226 (+)
Gene ID: HRGMv2_0438_2_61
Type: CAZyme
Location: 91333 - 94017 (+)
Gene ID: HRGMv2_0438_2_62
Type: CAZyme
Location: 94118 - 96499 (+)
Gene ID: HRGMv2_0438_2_63
Type: CAZyme
Location: 96520 - 98979 (+)
Gene ID: HRGMv2_0438_2_64
Type: pfam
Location: 99119 - 99928 (+)
Gene ID: HRGMv2_0438_2_65
Type: pfam
Location: 99994 - 101238 (+)
Gene ID: HRGMv2_0438_2_66
Type: TC
Location: 101373 - 102059 (-)
Gene ID: HRGMv2_0438_2_67
Type: pfam
Location: 102188 - 103906 (-)
Gene ID: HRGMv2_0438_2_68
Type: pfam
Location: 103909 - 105339 (-)
Gene ID: HRGMv2_0438_2_69
Type: CAZyme
Location: 105600 - 107825 (-)
Gene ID: HRGMv2_0438_2_70
Type: CAZyme
Location: 107899 - 109149 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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