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Cluster: HRGMv2_0438_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_2 HRGMv2_0438_2_13 12767 15889 + 1.B.14.6.1
TC HRGMv2_0438_2 HRGMv2_0438_2_14 15911 17656 + 8.A.46.1.3
pfam HRGMv2_0438_2 HRGMv2_0438_2_15 17672 18052 + TIG
CAZyme HRGMv2_0438_2 HRGMv2_0438_2_16 18071 19249 + GH26
CAZyme HRGMv2_0438_2 HRGMv2_0438_2_17 19263 22994 + GH2
TC HRGMv2_0438_2 HRGMv2_0438_2_18 23177 24730 - 8.A.46.1.3
TC HRGMv2_0438_2 HRGMv2_0438_2_19 24743 27685 - 1.B.14.6.1
Gene ID: HRGMv2_0438_2_13
Type: TC
Location: 12767 - 15889 (+)
Gene ID: HRGMv2_0438_2_14
Type: TC
Location: 15911 - 17656 (+)
Gene ID: HRGMv2_0438_2_15
Type: pfam
Location: 17672 - 18052 (+)
Gene ID: HRGMv2_0438_2_16
Type: CAZyme
Location: 18071 - 19249 (+)
Gene ID: HRGMv2_0438_2_17
Type: CAZyme
Location: 19263 - 22994 (+)
Gene ID: HRGMv2_0438_2_18
Type: TC
Location: 23177 - 24730 (-)
Gene ID: HRGMv2_0438_2_19
Type: TC
Location: 24743 - 27685 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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