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Cluster: HRGMv2_0438_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_15 HRGMv2_0438_15_20 20879 24310 + 1.B.14.6.1
sulfatase HRGMv2_0438_15 HRGMv2_0438_15_21 24322 25866 + S1_27
CAZyme HRGMv2_0438_15 HRGMv2_0438_15_22 25901 27970 + GH63
CAZyme HRGMv2_0438_15 HRGMv2_0438_15_23 28005 31250 + GH2
peptidase HRGMv2_0438_15 HRGMv2_0438_15_24 31275 32807 + M28.UPF
pfam HRGMv2_0438_15 HRGMv2_0438_15_25 33391 35232 + CarboxypepD_reg | CarboxypepD_reg | CarbopepD_reg_2
CAZyme HRGMv2_0438_15 HRGMv2_0438_15_26 35336 36781 + GH76
TC HRGMv2_0438_15 HRGMv2_0438_15_27 36800 39970 + 1.B.14.6.1
Gene ID: HRGMv2_0438_15_20
Type: TC
Location: 20879 - 24310 (+)
Gene ID: HRGMv2_0438_15_21
Type: sulfatase
Location: 24322 - 25866 (+)
Gene ID: HRGMv2_0438_15_22
Type: CAZyme
Location: 25901 - 27970 (+)
Gene ID: HRGMv2_0438_15_23
Type: CAZyme
Location: 28005 - 31250 (+)
Gene ID: HRGMv2_0438_15_24
Type: peptidase
Location: 31275 - 32807 (+)
Gene ID: HRGMv2_0438_15_25
Type: pfam
Location: 33391 - 35232 (+)
Gene ID: HRGMv2_0438_15_26
Type: CAZyme
Location: 35336 - 36781 (+)
Gene ID: HRGMv2_0438_15_27
Type: TC
Location: 36800 - 39970 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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