dbCAN Logo

Cluster: HRGMv2_0438_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0438_38 HRGMv2_0438_38_6 8165 10375 - GH36
pfam HRGMv2_0438_38 HRGMv2_0438_38_7 10475 11239 - adh_short | KR | adh_short_C2
TC HRGMv2_0438_38 HRGMv2_0438_38_8 11435 12841 + 3.A.1.11.8
TC HRGMv2_0438_38 HRGMv2_0438_38_9 12831 13631 + 3.A.1.11.8
TC HRGMv2_0438_38 HRGMv2_0438_38_10 13628 14419 + 3.A.1.11.8
TC HRGMv2_0438_38 HRGMv2_0438_38_11 14484 15833 + 3.A.1.11.2
TC HRGMv2_0438_38 HRGMv2_0438_38_12 16058 16732 + 9.B.186.1.3
CAZyme HRGMv2_0438_38 HRGMv2_0438_38_13 16749 17534 + GT51
pfam HRGMv2_0438_38 HRGMv2_0438_38_14 17593 18741 - Cyt_bd_oxida_II
TC HRGMv2_0438_38 HRGMv2_0438_38_15 18762 20324 - 3.D.4.3.2
Gene ID: HRGMv2_0438_38_6
Type: CAZyme
Location: 8165 - 10375 (-)
Gene ID: HRGMv2_0438_38_7
Type: pfam
Location: 10475 - 11239 (-)
Gene ID: HRGMv2_0438_38_8
Type: TC
Location: 11435 - 12841 (+)
Gene ID: HRGMv2_0438_38_9
Type: TC
Location: 12831 - 13631 (+)
Gene ID: HRGMv2_0438_38_10
Type: TC
Location: 13628 - 14419 (+)
Gene ID: HRGMv2_0438_38_11
Type: TC
Location: 14484 - 15833 (+)
Gene ID: HRGMv2_0438_38_12
Type: TC
Location: 16058 - 16732 (+)
Gene ID: HRGMv2_0438_38_13
Type: CAZyme
Location: 16749 - 17534 (+)
Gene ID: HRGMv2_0438_38_14
Type: pfam
Location: 17593 - 18741 (-)
Gene ID: HRGMv2_0438_38_15
Type: TC
Location: 18762 - 20324 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List