Genome Details
Selected Rep_genome_ID: HRGMv2_0390
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp944320195
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0390 | 2,832,060 | 97.91% | 0.37% | UK | Europe | HRGM |
| Rep_188 | 2,604,381 | 95.6019% | 0.246914% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0390_CGC29 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0390_CGC6 | CGCFAM_00030 | Yes | 3 | 1 | |
| HRGMv2_0390_CGC3 | CGCFAM_00082 | Yes | 8 | 4 | beta-mannan |
| HRGMv2_0390_CGC20 | CGCFAM_00083 | Yes | 7 | 3 | beta-glucan |
| HRGMv2_0390_CGC11 | CGCFAM_00146 | Yes | 8 | 5 | |
| HRGMv2_0390_CGC5 | CGCFAM_00184 | Yes | 6 | 2 | |
| HRGMv2_0390_CGC2 | CGCFAM_00337 | Yes | 9 | 2 | |
| HRGMv2_0390_CGC4 | CGCFAM_00349 | Yes | 8 | 2 | |
| HRGMv2_0390_CGC12 | CGCFAM_00437 | Yes | 8 | 1 | |
| HRGMv2_0390_CGC14 | CGCFAM_00635 | Yes | 4 | 1 | |
| HRGMv2_0390_CGC24 | CGCFAM_00897 | Yes | 7 | 2 | |
| HRGMv2_0390_CGC9 | CGCFAM_01002 | Yes | 6 | 1 | |
| HRGMv2_0390_CGC28 | CGCFAM_01106 | Yes | 4 | 1 | |
| HRGMv2_0390_CGC10 | CGCFAM_01347 | Yes | 4 | 2 | |
| HRGMv2_0390_CGC22 | CGCFAM_02165 | Yes | 5 | 3 | |
| HRGMv2_0390_CGC27 | CGCFAM_02717 | Yes | 9 | 6 | |
| HRGMv2_0390_CGC18 | CGCFAM_03978 | Yes | 4 | 1 | |
| HRGMv2_0390_CGC1 | CGCFAM_04549 | Yes | 9 | 4 | |
| HRGMv2_0390_CGC13 | CGCFAM_09592 | Yes | 6 | 2 |
Top CAZyme Families