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Cluster: HRGMv2_0390_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0390_24 HRGMv2_0390_24_1 225 1250 - GH43_17
CAZyme HRGMv2_0390_24 HRGMv2_0390_24_2 1280 2788 - GH30_2
CAZyme HRGMv2_0390_24 HRGMv2_0390_24_3 2846 4768 - GH43_19 | GH43_34
CAZyme HRGMv2_0390_24 HRGMv2_0390_24_4 4812 7163 - GH35
NULL(UNKNOWN) HRGMv2_0390_24 HRGMv2_0390_24_5 7219 7320 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0390_24 HRGMv2_0390_24_6 7516 9069 - GH30_4
CAZyme HRGMv2_0390_24 HRGMv2_0390_24_7 9256 10863 - GH30_4
TC HRGMv2_0390_24 HRGMv2_0390_24_8 10863 12479 - 8.A.46.1.6
TC HRGMv2_0390_24 HRGMv2_0390_24_9 12513 15542 - 1.B.14.6.1
Gene ID: HRGMv2_0390_24_1
Type: CAZyme
Location: 225 - 1250 (-)
Gene ID: HRGMv2_0390_24_2
Type: CAZyme
Location: 1280 - 2788 (-)
Gene ID: HRGMv2_0390_24_3
Type: CAZyme
Location: 2846 - 4768 (-)
Gene ID: HRGMv2_0390_24_4
Type: CAZyme
Location: 4812 - 7163 (-)
Gene ID: HRGMv2_0390_24_5
Type:
Location: 7219 - 7320 (-)
Gene ID: HRGMv2_0390_24_6
Type: CAZyme
Location: 7516 - 9069 (-)
Gene ID: HRGMv2_0390_24_7
Type: CAZyme
Location: 9256 - 10863 (-)
Gene ID: HRGMv2_0390_24_8
Type: TC
Location: 10863 - 12479 (-)
Gene ID: HRGMv2_0390_24_9
Type: TC
Location: 12513 - 15542 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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