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Cluster: HRGMv2_0390_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0390_19 HRGMv2_0390_19_27 25848 27071 + 2.A.1.35.1
STP HRGMv2_0390_19 HRGMv2_0390_19_28 27353 28573 + HD
pfam HRGMv2_0390_19 HRGMv2_0390_19_29 28629 29678 + Hexapep | Hexapep | LpxD | Hexapep_2 | Hexapep_2 | Hexapep_2
CAZyme HRGMv2_0390_19 HRGMv2_0390_19_30 29665 31056 + CE11
pfam HRGMv2_0390_19 HRGMv2_0390_19_31 31181 31951 + Hexapep | Acetyltransf_11
pfam HRGMv2_0390_19 HRGMv2_0390_19_32 31956 32852 + IPPT | IPT
CAZyme HRGMv2_0390_19 HRGMv2_0390_19_33 32903 35440 + GT51
Gene ID: HRGMv2_0390_19_27
Type: TC
Location: 25848 - 27071 (+)
Gene ID: HRGMv2_0390_19_28
Type: STP
Location: 27353 - 28573 (+)
Gene ID: HRGMv2_0390_19_29
Type: pfam
Location: 28629 - 29678 (+)
Gene ID: HRGMv2_0390_19_30
Type: CAZyme
Location: 29665 - 31056 (+)
Gene ID: HRGMv2_0390_19_31
Type: pfam
Location: 31181 - 31951 (+)
Gene ID: HRGMv2_0390_19_32
Type: pfam
Location: 31956 - 32852 (+)
Gene ID: HRGMv2_0390_19_33
Type: CAZyme
Location: 32903 - 35440 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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