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Cluster: HRGMv2_0390_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0390_1 HRGMv2_0390_1_65 82326 83441 + GH5_38
CAZyme HRGMv2_0390_1 HRGMv2_0390_1_66 83471 85963 + GH94
TC HRGMv2_0390_1 HRGMv2_0390_1_67 86002 87387 + 2.A.2.3.6
CAZyme HRGMv2_0390_1 HRGMv2_0390_1_68 87582 88781 + GH5_4
TC HRGMv2_0390_1 HRGMv2_0390_1_69 89060 92239 + 1.B.14.6.2
TC HRGMv2_0390_1 HRGMv2_0390_1_70 92254 94005 + 8.A.46.2.2
NULL(UNKNOWN) HRGMv2_0390_1 HRGMv2_0390_1_71 94028 95023 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0390_1 HRGMv2_0390_1_72 95143 97428 + GH3
Gene ID: HRGMv2_0390_1_65
Type: CAZyme
Location: 82326 - 83441 (+)
Gene ID: HRGMv2_0390_1_66
Type: CAZyme
Location: 83471 - 85963 (+)
Gene ID: HRGMv2_0390_1_67
Type: TC
Location: 86002 - 87387 (+)
Gene ID: HRGMv2_0390_1_68
Type: CAZyme
Location: 87582 - 88781 (+)
Gene ID: HRGMv2_0390_1_69
Type: TC
Location: 89060 - 92239 (+)
Gene ID: HRGMv2_0390_1_70
Type: TC
Location: 92254 - 94005 (+)
Gene ID: HRGMv2_0390_1_71
Type:
Location: 94028 - 95023 (+)
Gene ID: HRGMv2_0390_1_72
Type: CAZyme
Location: 95143 - 97428 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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