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Cluster: HRGMv2_0390_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0390_1 HRGMv2_0390_1_136 161020 162090 - GT9
pfam HRGMv2_0390_1 HRGMv2_0390_1_137 162283 163308 + 2-Hacid_dh | 2-Hacid_dh_C
TC HRGMv2_0390_1 HRGMv2_0390_1_138 163681 163917 + 3.D.1.6.3
pfam HRGMv2_0390_1 HRGMv2_0390_1_139 163937 165199 + ketoacyl-synt | Ketoacyl-synt_C
pfam HRGMv2_0390_1 HRGMv2_0390_1_140 165192 166229 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
CAZyme HRGMv2_0390_1 HRGMv2_0390_1_141 166764 167900 - GT4
pfam HRGMv2_0390_1 HRGMv2_0390_1_142 167965 168843 - Lip_A_acyltrans
TC HRGMv2_0390_1 HRGMv2_0390_1_143 168849 170678 - 3.A.1.106.1
Gene ID: HRGMv2_0390_1_136
Type: CAZyme
Location: 161020 - 162090 (-)
Gene ID: HRGMv2_0390_1_137
Type: pfam
Location: 162283 - 163308 (+)
Gene ID: HRGMv2_0390_1_138
Type: TC
Location: 163681 - 163917 (+)
Gene ID: HRGMv2_0390_1_139
Type: pfam
Location: 163937 - 165199 (+)
Gene ID: HRGMv2_0390_1_140
Type: pfam
Location: 165192 - 166229 (+)
Gene ID: HRGMv2_0390_1_141
Type: CAZyme
Location: 166764 - 167900 (-)
Gene ID: HRGMv2_0390_1_142
Type: pfam
Location: 167965 - 168843 (-)
Gene ID: HRGMv2_0390_1_143
Type: TC
Location: 168849 - 170678 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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