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Cluster: HRGMv2_0390_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0390_6 HRGMv2_0390_6_20 21428 22696 - 3.D.5.1.1
TC HRGMv2_0390_6 HRGMv2_0390_6_21 22808 23434 - 3.D.5.1.1
TC HRGMv2_0390_6 HRGMv2_0390_6_22 23500 24135 - 3.D.5.1.1
pfam HRGMv2_0390_6 HRGMv2_0390_6_23 24132 24860 - FMN_bind
TC HRGMv2_0390_6 HRGMv2_0390_6_24 24880 26034 - 3.D.5.1.1
pfam HRGMv2_0390_6 HRGMv2_0390_6_25 26101 27417 - NQRA_N | NQRA_SLBB | NQRA_2nd
pfam HRGMv2_0390_6 HRGMv2_0390_6_26 27918 28805 + Acyl_transf_1 | SAT
CAZyme HRGMv2_0390_6 HRGMv2_0390_6_27 28927 30609 + GH13_38
Gene ID: HRGMv2_0390_6_20
Type: TC
Location: 21428 - 22696 (-)
Gene ID: HRGMv2_0390_6_21
Type: TC
Location: 22808 - 23434 (-)
Gene ID: HRGMv2_0390_6_22
Type: TC
Location: 23500 - 24135 (-)
Gene ID: HRGMv2_0390_6_23
Type: pfam
Location: 24132 - 24860 (-)
Gene ID: HRGMv2_0390_6_24
Type: TC
Location: 24880 - 26034 (-)
Gene ID: HRGMv2_0390_6_25
Type: pfam
Location: 26101 - 27417 (-)
Gene ID: HRGMv2_0390_6_26
Type: pfam
Location: 27918 - 28805 (+)
Gene ID: HRGMv2_0390_6_27
Type: CAZyme
Location: 28927 - 30609 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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