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Cluster: HRGMv2_0390_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0390_5 HRGMv2_0390_5_75 88530 90455 - GH67
TF HRGMv2_0390_5 HRGMv2_0390_5_76 90460 94506 - HTH_AraC
CAZyme HRGMv2_0390_5 HRGMv2_0390_5_77 94736 97285 - GH115
TC HRGMv2_0390_5 HRGMv2_0390_5_78 97521 98933 + 2.A.2.3.2
CAZyme HRGMv2_0390_5 HRGMv2_0390_5_79 98942 100057 + GH10
CAZyme HRGMv2_0390_5 HRGMv2_0390_5_80 100157 101122 + GH43_1
CAZyme HRGMv2_0390_5 HRGMv2_0390_5_81 101919 103739 + CBM91 | GH43_12
TC HRGMv2_0390_5 HRGMv2_0390_5_82 104035 105135 + 9.B.146.1.4
Gene ID: HRGMv2_0390_5_75
Type: CAZyme
Location: 88530 - 90455 (-)
Gene ID: HRGMv2_0390_5_76
Type: TF
Location: 90460 - 94506 (-)
Gene ID: HRGMv2_0390_5_77
Type: CAZyme
Location: 94736 - 97285 (-)
Gene ID: HRGMv2_0390_5_78
Type: TC
Location: 97521 - 98933 (+)
Gene ID: HRGMv2_0390_5_79
Type: CAZyme
Location: 98942 - 100057 (+)
Gene ID: HRGMv2_0390_5_80
Type: CAZyme
Location: 100157 - 101122 (+)
Gene ID: HRGMv2_0390_5_81
Type: CAZyme
Location: 101919 - 103739 (+)
Gene ID: HRGMv2_0390_5_82
Type: TC
Location: 104035 - 105135 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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