Cluster: HRGMv2_0390_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0390
- CGC Family ID: CGCFAM_01002
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0390_4 | HRGMv2_0390_4_46 | 57042 | 58898 | - | 2.A.47.4.8 |
| pfam | HRGMv2_0390_4 | HRGMv2_0390_4_47 | 59121 | 60602 | - | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| TC | HRGMv2_0390_4 | HRGMv2_0390_4_48 | 60949 | 62943 | + | 3.A.1.120.6 |
| peptidase | HRGMv2_0390_4 | HRGMv2_0390_4_49 | 63116 | 65155 | + | M13.017 |
| NULL(UNKNOWN) | HRGMv2_0390_4 | HRGMv2_0390_4_50 | 65247 | 65981 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0390_4 | HRGMv2_0390_4_51 | 66078 | 67094 | - | GT2 |
Gene ID: HRGMv2_0390_4_46
Type: TC
Location: 57042 - 58898 (-)
Type: TC
Location: 57042 - 58898 (-)
Gene ID: HRGMv2_0390_4_47
Type: pfam
Location: 59121 - 60602 (-)
Type: pfam
Location: 59121 - 60602 (-)
Gene ID: HRGMv2_0390_4_48
Type: TC
Location: 60949 - 62943 (+)
Type: TC
Location: 60949 - 62943 (+)
Gene ID: HRGMv2_0390_4_49
Type: peptidase
Location: 63116 - 65155 (+)
Type: peptidase
Location: 63116 - 65155 (+)
Gene ID: HRGMv2_0390_4_50
Type:
Location: 65247 - 65981 (+)
Type:
Location: 65247 - 65981 (+)
Gene ID: HRGMv2_0390_4_51
Type: CAZyme
Location: 66078 - 67094 (-)
Type: CAZyme
Location: 66078 - 67094 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp944320195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.