dbCAN Logo

Genome Details

Selected Rep_genome_ID: HRGMv2_0311
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0311 3,265,319 98.17% 0.377% UK Europe HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0311_CGC41 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0311_CGC45 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0311_CGC21 CGCFAM_00068 Yes 11 6
HRGMv2_0311_CGC33 CGCFAM_00068 Yes 8 2
HRGMv2_0311_CGC42 CGCFAM_00118 Yes 7 3
HRGMv2_0311_CGC44 CGCFAM_00321 Yes 8 5
HRGMv2_0311_CGC15 CGCFAM_00395 Yes 25 4
HRGMv2_0311_CGC40 CGCFAM_00574 Yes 8 1
HRGMv2_0311_CGC13 CGCFAM_00714 Yes 7 1
HRGMv2_0311_CGC5 CGCFAM_01017 Yes 5 2
HRGMv2_0311_CGC23 CGCFAM_01067 Yes 8 1
HRGMv2_0311_CGC46 CGCFAM_01223 Yes 4 2
HRGMv2_0311_CGC12 CGCFAM_01250 Yes 12 6
HRGMv2_0311_CGC10 CGCFAM_01312 Yes 8 1
HRGMv2_0311_CGC28 CGCFAM_01461 Yes 12 1
HRGMv2_0311_CGC16 CGCFAM_01504 Yes 7 3
HRGMv2_0311_CGC6 CGCFAM_01521 Yes 8 2
HRGMv2_0311_CGC31 CGCFAM_01593 Yes 17 7
HRGMv2_0311_CGC37 CGCFAM_01828 Yes 3 1
HRGMv2_0311_CGC19 CGCFAM_02234 Yes 6 1
HRGMv2_0311_CGC39 CGCFAM_02949 Yes 12 2
HRGMv2_0311_CGC17 CGCFAM_03047 Yes 10 3
HRGMv2_0311_CGC32 CGCFAM_03987 Yes 6 3
HRGMv2_0311_CGC30 CGCFAM_04499 Yes 10 3
HRGMv2_0311_CGC14 CGCFAM_05350 Yes 3 1
Top CAZyme Families