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Cluster: HRGMv2_0311_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0311_13 HRGMv2_0311_13_48 56234 57550 + GT30
STP HRGMv2_0311_13 HRGMv2_0311_13_49 57560 58105 + Pribosyltran
pfam HRGMv2_0311_13 HRGMv2_0311_13_50 58190 58798 + ADK | AAA_17 | AAA_18 | AAA_33
TC HRGMv2_0311_13 HRGMv2_0311_13_51 59057 61177 + 1.B.6.1.14
TC HRGMv2_0311_13 HRGMv2_0311_13_52 61292 62047 + 3.A.1.3.15
pfam HRGMv2_0311_13 HRGMv2_0311_13_53 62044 63330 + SUFBD_core | SufBD_N | SufBD_N
STP HRGMv2_0311_13 HRGMv2_0311_13_54 63330 64541 + Aminotran_1_2
TC HRGMv2_0311_13 HRGMv2_0311_13_55 64543 65745 + 2.A.23.2.7
Gene ID: HRGMv2_0311_13_48
Type: CAZyme
Location: 56234 - 57550 (+)
Gene ID: HRGMv2_0311_13_49
Type: STP
Location: 57560 - 58105 (+)
Gene ID: HRGMv2_0311_13_50
Type: pfam
Location: 58190 - 58798 (+)
Gene ID: HRGMv2_0311_13_51
Type: TC
Location: 59057 - 61177 (+)
Gene ID: HRGMv2_0311_13_52
Type: TC
Location: 61292 - 62047 (+)
Gene ID: HRGMv2_0311_13_53
Type: pfam
Location: 62044 - 63330 (+)
Gene ID: HRGMv2_0311_13_54
Type: STP
Location: 63330 - 64541 (+)
Gene ID: HRGMv2_0311_13_55
Type: TC
Location: 64543 - 65745 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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