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Cluster: HRGMv2_0311_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0311_5 HRGMv2_0311_5_9 6826 8106 + 9.A.40.2.2
STP HRGMv2_0311_5 HRGMv2_0311_5_10 8234 8830 + Sigma70_r2 | Sigma70_r4_2
TC HRGMv2_0311_5 HRGMv2_0311_5_11 9057 10307 + 2.A.1.2.97
NULL(UNKNOWN) HRGMv2_0311_5 HRGMv2_0311_5_12 10442 11626 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0311_5 HRGMv2_0311_5_13 11933 13777 + 3.A.1.106.1
CAZyme HRGMv2_0311_5 HRGMv2_0311_5_14 13937 15139 + GH26
CAZyme HRGMv2_0311_5 HRGMv2_0311_5_15 15214 16383 + GH130_1
TC HRGMv2_0311_5 HRGMv2_0311_5_16 16449 17903 + 2.A.2.3.4
Gene ID: HRGMv2_0311_5_9
Type: TC
Location: 6826 - 8106 (+)
Gene ID: HRGMv2_0311_5_10
Type: STP
Location: 8234 - 8830 (+)
Gene ID: HRGMv2_0311_5_11
Type: TC
Location: 9057 - 10307 (+)
Gene ID: HRGMv2_0311_5_12
Type:
Location: 10442 - 11626 (+)
Gene ID: HRGMv2_0311_5_13
Type: TC
Location: 11933 - 13777 (+)
Gene ID: HRGMv2_0311_5_14
Type: CAZyme
Location: 13937 - 15139 (+)
Gene ID: HRGMv2_0311_5_15
Type: CAZyme
Location: 15214 - 16383 (+)
Gene ID: HRGMv2_0311_5_16
Type: TC
Location: 16449 - 17903 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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