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Cluster: HRGMv2_0311_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0311_18 HRGMv2_0311_18_20 18733 19881 - GT4
pfam HRGMv2_0311_18 HRGMv2_0311_18_21 19896 20900 - Acyl_transf_3
TC HRGMv2_0311_18 HRGMv2_0311_18_22 20916 23333 - 8.A.3.3.4
pfam HRGMv2_0311_18 HRGMv2_0311_18_23 23462 24304 - Poly_export | SLBB_2
TC HRGMv2_0311_18 HRGMv2_0311_18_24 24586 25707 - 9.B.146.1.4
pfam HRGMv2_0311_18 HRGMv2_0311_18_25 25787 26338 - NusG
NULL(UNKNOWN) HRGMv2_0311_18 HRGMv2_0311_18_26 26507 26794 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0311_18 HRGMv2_0311_18_27 26908 28101 + CE1
pfam HRGMv2_0311_18 HRGMv2_0311_18_28 28487 29485 + Radical_SAM | BATS
CAZyme HRGMv2_0311_18 HRGMv2_0311_18_29 29541 30491 + GT2
Gene ID: HRGMv2_0311_18_20
Type: CAZyme
Location: 18733 - 19881 (-)
Gene ID: HRGMv2_0311_18_21
Type: pfam
Location: 19896 - 20900 (-)
Gene ID: HRGMv2_0311_18_22
Type: TC
Location: 20916 - 23333 (-)
Gene ID: HRGMv2_0311_18_23
Type: pfam
Location: 23462 - 24304 (-)
Gene ID: HRGMv2_0311_18_24
Type: TC
Location: 24586 - 25707 (-)
Gene ID: HRGMv2_0311_18_25
Type: pfam
Location: 25787 - 26338 (-)
Gene ID: HRGMv2_0311_18_26
Type:
Location: 26507 - 26794 (-)
Gene ID: HRGMv2_0311_18_27
Type: CAZyme
Location: 26908 - 28101 (+)
Gene ID: HRGMv2_0311_18_28
Type: pfam
Location: 28487 - 29485 (+)
Gene ID: HRGMv2_0311_18_29
Type: CAZyme
Location: 29541 - 30491 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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