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Cluster: HRGMv2_0311_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0311_28 HRGMv2_0311_28_22 23209 24681 - 2.A.1.1.3
pfam HRGMv2_0311_28 HRGMv2_0311_28_23 24834 26153 - AP_endonuc_2
pfam HRGMv2_0311_28 HRGMv2_0311_28_24 26174 27655 - FGGY_N | FGGY_C
CAZyme HRGMv2_0311_28 HRGMv2_0311_28_25 27901 29664 - GH5_4
NULL(UNKNOWN) HRGMv2_0311_28 HRGMv2_0311_28_26 29686 31812 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0311_28 HRGMv2_0311_28_27 31826 33595 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0311_28 HRGMv2_0311_28_28 33673 35340 - 8.A.46.1.2
TC HRGMv2_0311_28 HRGMv2_0311_28_29 35418 38585 - 1.B.14.6.1
Gene ID: HRGMv2_0311_28_22
Type: TC
Location: 23209 - 24681 (-)
Gene ID: HRGMv2_0311_28_23
Type: pfam
Location: 24834 - 26153 (-)
Gene ID: HRGMv2_0311_28_24
Type: pfam
Location: 26174 - 27655 (-)
Gene ID: HRGMv2_0311_28_25
Type: CAZyme
Location: 27901 - 29664 (-)
Gene ID: HRGMv2_0311_28_26
Type:
Location: 29686 - 31812 (-)
Gene ID: HRGMv2_0311_28_27
Type:
Location: 31826 - 33595 (-)
Gene ID: HRGMv2_0311_28_28
Type: TC
Location: 33673 - 35340 (-)
Gene ID: HRGMv2_0311_28_29
Type: TC
Location: 35418 - 38585 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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