Cluster: HRGMv2_0311_CGC31
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0311
- CGC Family ID: CGCFAM_01593
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0311_18 | HRGMv2_0311_18_37 | 36192 | 37271 | - | GT4 |
| CAZyme | HRGMv2_0311_18 | HRGMv2_0311_18_38 | 37314 | 38159 | - | GT2 |
| pfam | HRGMv2_0311_18 | HRGMv2_0311_18_39 | 38332 | 39843 | + | Phosphodiest | Metalloenzyme | iPGM_N |
| sulfatase | HRGMv2_0311_18 | HRGMv2_0311_18_40 | 39843 | 41417 | + | S1_14 |
| CAZyme | HRGMv2_0311_18 | HRGMv2_0311_18_41 | 41421 | 42608 | + | GH3 |
| CAZyme | HRGMv2_0311_18 | HRGMv2_0311_18_42 | 42729 | 43724 | - | GH43_34 |
| STP | HRGMv2_0311_18 | HRGMv2_0311_18_43 | 43773 | 44789 | - | FecR |
| STP | HRGMv2_0311_18 | HRGMv2_0311_18_44 | 44795 | 45145 | - | Sigma70_r4_2 |
| TC | HRGMv2_0311_18 | HRGMv2_0311_18_45 | 45598 | 48897 | + | 1.B.14.6.1 |
| TC | HRGMv2_0311_18 | HRGMv2_0311_18_46 | 48915 | 50654 | + | 8.A.46.1.1 |
| pfam | HRGMv2_0311_18 | HRGMv2_0311_18_47 | 51063 | 52619 | + | SusF_SusE | SusF_SusE |
| CAZyme | HRGMv2_0311_18 | HRGMv2_0311_18_48 | 52642 | 54072 | + | GH27 |
| pfam | HRGMv2_0311_18 | HRGMv2_0311_18_49 | 54123 | 55412 | + | SusF_SusE |
| CAZyme | HRGMv2_0311_18 | HRGMv2_0311_18_50 | 55559 | 57814 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_0311_18 | HRGMv2_0311_18_51 | 57811 | 59997 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0311_18 | HRGMv2_0311_18_52 | 60000 | 60680 | - | RadC | UPF0758_N |
| CAZyme | HRGMv2_0311_18 | HRGMv2_0311_18_53 | 60677 | 61723 | - | GT2 |
Gene ID: HRGMv2_0311_18_37
Type: CAZyme
Location: 36192 - 37271 (-)
Type: CAZyme
Location: 36192 - 37271 (-)
Gene ID: HRGMv2_0311_18_38
Type: CAZyme
Location: 37314 - 38159 (-)
Type: CAZyme
Location: 37314 - 38159 (-)
Gene ID: HRGMv2_0311_18_39
Type: pfam
Location: 38332 - 39843 (+)
Type: pfam
Location: 38332 - 39843 (+)
Gene ID: HRGMv2_0311_18_40
Type: sulfatase
Location: 39843 - 41417 (+)
Type: sulfatase
Location: 39843 - 41417 (+)
Gene ID: HRGMv2_0311_18_41
Type: CAZyme
Location: 41421 - 42608 (+)
Type: CAZyme
Location: 41421 - 42608 (+)
Gene ID: HRGMv2_0311_18_42
Type: CAZyme
Location: 42729 - 43724 (-)
Type: CAZyme
Location: 42729 - 43724 (-)
Gene ID: HRGMv2_0311_18_43
Type: STP
Location: 43773 - 44789 (-)
Type: STP
Location: 43773 - 44789 (-)
Gene ID: HRGMv2_0311_18_44
Type: STP
Location: 44795 - 45145 (-)
Type: STP
Location: 44795 - 45145 (-)
Gene ID: HRGMv2_0311_18_45
Type: TC
Location: 45598 - 48897 (+)
Type: TC
Location: 45598 - 48897 (+)
Gene ID: HRGMv2_0311_18_46
Type: TC
Location: 48915 - 50654 (+)
Type: TC
Location: 48915 - 50654 (+)
Gene ID: HRGMv2_0311_18_47
Type: pfam
Location: 51063 - 52619 (+)
Type: pfam
Location: 51063 - 52619 (+)
Gene ID: HRGMv2_0311_18_48
Type: CAZyme
Location: 52642 - 54072 (+)
Type: CAZyme
Location: 52642 - 54072 (+)
Gene ID: HRGMv2_0311_18_49
Type: pfam
Location: 54123 - 55412 (+)
Type: pfam
Location: 54123 - 55412 (+)
Gene ID: HRGMv2_0311_18_50
Type: CAZyme
Location: 55559 - 57814 (+)
Type: CAZyme
Location: 55559 - 57814 (+)
Gene ID: HRGMv2_0311_18_51
Type:
Location: 57811 - 59997 (+)
Type:
Location: 57811 - 59997 (+)
Gene ID: HRGMv2_0311_18_52
Type: pfam
Location: 60000 - 60680 (-)
Type: pfam
Location: 60000 - 60680 (-)
Gene ID: HRGMv2_0311_18_53
Type: CAZyme
Location: 60677 - 61723 (-)
Type: CAZyme
Location: 60677 - 61723 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.