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Cluster: HRGMv2_0311_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0311_21 HRGMv2_0311_21_21 26528 28651 - GH97
CAZyme HRGMv2_0311_21 HRGMv2_0311_21_22 28663 30078 - GH27
pfam HRGMv2_0311_21 HRGMv2_0311_21_23 30092 31600 - SusF_SusE | SusF_SusE | SusF_SusE | SusF_SusE
pfam HRGMv2_0311_21 HRGMv2_0311_21_24 31612 33348 - SusD_RagB | SusD-like_3
TC HRGMv2_0311_21 HRGMv2_0311_21_25 33374 36364 - 1.B.14.6.1
pfam HRGMv2_0311_21 HRGMv2_0311_21_26 36644 38308 - DUF6377
pfam HRGMv2_0311_21 HRGMv2_0311_21_27 38478 39527 - Porin_O_P | BBP2
TC HRGMv2_0311_21 HRGMv2_0311_21_28 39545 40921 - 9.B.10.1.1
Gene ID: HRGMv2_0311_21_21
Type: CAZyme
Location: 26528 - 28651 (-)
Gene ID: HRGMv2_0311_21_22
Type: CAZyme
Location: 28663 - 30078 (-)
Gene ID: HRGMv2_0311_21_23
Type: pfam
Location: 30092 - 31600 (-)
Gene ID: HRGMv2_0311_21_24
Type: pfam
Location: 31612 - 33348 (-)
Gene ID: HRGMv2_0311_21_25
Type: TC
Location: 33374 - 36364 (-)
Gene ID: HRGMv2_0311_21_26
Type: pfam
Location: 36644 - 38308 (-)
Gene ID: HRGMv2_0311_21_27
Type: pfam
Location: 38478 - 39527 (-)
Gene ID: HRGMv2_0311_21_28
Type: TC
Location: 39545 - 40921 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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