Cluster: HRGMv2_0311_CGC21
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0311
- CGC Family ID: CGCFAM_00068
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0311_11 | HRGMv2_0311_11_16 | 27560 | 30550 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0311_11 | HRGMv2_0311_11_17 | 30580 | 32307 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0311_11 | HRGMv2_0311_11_18 | 32338 | 32805 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0311_11 | HRGMv2_0311_11_19 | 32959 | 34416 | + | GH27 |
| NULL(UNKNOWN) | HRGMv2_0311_11 | HRGMv2_0311_11_20 | 34494 | 35885 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0311_11 | HRGMv2_0311_11_21 | 35897 | 36952 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0311_11 | HRGMv2_0311_11_22 | 37156 | 38142 | + | GH43_17 |
| CAZyme | HRGMv2_0311_11 | HRGMv2_0311_11_23 | 38139 | 40133 | + | GH97 |
| CAZyme | HRGMv2_0311_11 | HRGMv2_0311_11_24 | 40164 | 42470 | + | GH31_15 |
| CAZyme | HRGMv2_0311_11 | HRGMv2_0311_11_25 | 42490 | 44307 | + | GH2 |
| CAZyme | HRGMv2_0311_11 | HRGMv2_0311_11_26 | 44304 | 46232 | + | CE20 | CE20 |
Gene ID: HRGMv2_0311_11_16
Type: TC
Location: 27560 - 30550 (+)
Type: TC
Location: 27560 - 30550 (+)
Gene ID: HRGMv2_0311_11_17
Type: pfam
Location: 30580 - 32307 (+)
Type: pfam
Location: 30580 - 32307 (+)
Gene ID: HRGMv2_0311_11_18
Type:
Location: 32338 - 32805 (+)
Type:
Location: 32338 - 32805 (+)
Gene ID: HRGMv2_0311_11_19
Type: CAZyme
Location: 32959 - 34416 (+)
Type: CAZyme
Location: 32959 - 34416 (+)
Gene ID: HRGMv2_0311_11_20
Type:
Location: 34494 - 35885 (+)
Type:
Location: 34494 - 35885 (+)
Gene ID: HRGMv2_0311_11_21
Type:
Location: 35897 - 36952 (+)
Type:
Location: 35897 - 36952 (+)
Gene ID: HRGMv2_0311_11_22
Type: CAZyme
Location: 37156 - 38142 (+)
Type: CAZyme
Location: 37156 - 38142 (+)
Gene ID: HRGMv2_0311_11_23
Type: CAZyme
Location: 38139 - 40133 (+)
Type: CAZyme
Location: 38139 - 40133 (+)
Gene ID: HRGMv2_0311_11_24
Type: CAZyme
Location: 40164 - 42470 (+)
Type: CAZyme
Location: 40164 - 42470 (+)
Gene ID: HRGMv2_0311_11_25
Type: CAZyme
Location: 42490 - 44307 (+)
Type: CAZyme
Location: 42490 - 44307 (+)
Gene ID: HRGMv2_0311_11_26
Type: CAZyme
Location: 44304 - 46232 (+)
Type: CAZyme
Location: 44304 - 46232 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.