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Genome Details

Selected Rep_genome_ID: HRGMv2_0279
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
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Phylum
Bacteroidota
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Class
Bacteroidia
→
Order
Bacteroidales
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Family
Bacteroidaceae
→
Genus
Prevotella
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Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
GH169_maxbin.015_sub 3,262,659 97.22% 4.15% NA Africa H3AfricaPhase2
HRGMv2_0279 3,294,489 95.4% 0.123% Ghana Africa HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0279_CGC14 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0279_CGC18 CGCFAM_00001 Yes 7 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0279_CGC26 CGCFAM_00001 Yes 6 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0279_CGC9 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0279_CGC38 CGCFAM_00043 Yes 10 4 alpha-glucan
HRGMv2_0279_CGC3 CGCFAM_00241 Yes 7 4
HRGMv2_0279_CGC29 CGCFAM_00254 Yes 4 1
HRGMv2_0279_CGC53 CGCFAM_00445 Yes 4 2
HRGMv2_0279_CGC52 CGCFAM_00512 Yes 5 2
HRGMv2_0279_CGC12 CGCFAM_00521 Yes 8 2
HRGMv2_0279_CGC50 CGCFAM_00665 Yes 3 1
HRGMv2_0279_CGC20 CGCFAM_00776 Yes 14 5
HRGMv2_0279_CGC15 CGCFAM_01356 Yes 7 2
HRGMv2_0279_CGC36 CGCFAM_01814 Yes 12 4
HRGMv2_0279_CGC17 CGCFAM_01872 Yes 11 3
HRGMv2_0279_CGC24 CGCFAM_01981 Yes 4 2
HRGMv2_0279_CGC43 CGCFAM_02013 Yes 5 2
HRGMv2_0279_CGC11 CGCFAM_02015 Yes 16 2
HRGMv2_0279_CGC19 CGCFAM_02523 Yes 3 1
HRGMv2_0279_CGC8 CGCFAM_02973 Yes 3 2
HRGMv2_0279_CGC13 CGCFAM_03278 Yes 8 2
HRGMv2_0279_CGC16 CGCFAM_04154 Yes 4 2
HRGMv2_0279_CGC30 CGCFAM_04694 Yes 6 1
HRGMv2_0279_CGC40 CGCFAM_07159 Yes 4 1
HRGMv2_0279_CGC4 CGCFAM_09568 Yes 8 1
Top CAZyme Families