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Cluster: HRGMv2_0279_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0279_5 HRGMv2_0279_5_32 41254 41964 - 2.A.76.1.6
pfam HRGMv2_0279_5 HRGMv2_0279_5_33 42097 43077 + ROK
pfam HRGMv2_0279_5 HRGMv2_0279_5_34 43238 44377 + YhcG_C | DUF1016_N
CAZyme HRGMv2_0279_5 HRGMv2_0279_5_35 44420 46048 + GH20
pfam HRGMv2_0279_5 HRGMv2_0279_5_36 46131 47147 + Aminotran_4
pfam HRGMv2_0279_5 HRGMv2_0279_5_37 47364 48134 + Methyltransf_4 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_0279_5 HRGMv2_0279_5_38 48230 49333 + 3.A.1.132.3
TF HRGMv2_0279_5 HRGMv2_0279_5_39 49378 49968 + GerE
STP HRGMv2_0279_5 HRGMv2_0279_5_40 50096 51166 + FecR
TC HRGMv2_0279_5 HRGMv2_0279_5_41 51492 54794 + 1.B.14.6.13
TC HRGMv2_0279_5 HRGMv2_0279_5_42 54839 56446 + 8.A.46.2.2
CAZyme HRGMv2_0279_5 HRGMv2_0279_5_43 56499 57620 + GH18
pfam HRGMv2_0279_5 HRGMv2_0279_5_44 57663 58835 + BT_3987-like_N | Laminin_G_3
pfam HRGMv2_0279_5 HRGMv2_0279_5_45 59415 60524 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369
TC HRGMv2_0279_5 HRGMv2_0279_5_46 60574 62055 + 2.A.66.1.32
TC HRGMv2_0279_5 HRGMv2_0279_5_47 62084 62725 + 2.A.115.2.14
Gene ID: HRGMv2_0279_5_32
Type: TC
Location: 41254 - 41964 (-)
Gene ID: HRGMv2_0279_5_33
Type: pfam
Location: 42097 - 43077 (+)
Gene ID: HRGMv2_0279_5_34
Type: pfam
Location: 43238 - 44377 (+)
Gene ID: HRGMv2_0279_5_35
Type: CAZyme
Location: 44420 - 46048 (+)
Gene ID: HRGMv2_0279_5_36
Type: pfam
Location: 46131 - 47147 (+)
Gene ID: HRGMv2_0279_5_37
Type: pfam
Location: 47364 - 48134 (+)
Gene ID: HRGMv2_0279_5_38
Type: TC
Location: 48230 - 49333 (+)
Gene ID: HRGMv2_0279_5_39
Type: TF
Location: 49378 - 49968 (+)
Gene ID: HRGMv2_0279_5_40
Type: STP
Location: 50096 - 51166 (+)
Gene ID: HRGMv2_0279_5_41
Type: TC
Location: 51492 - 54794 (+)
Gene ID: HRGMv2_0279_5_42
Type: TC
Location: 54839 - 56446 (+)
Gene ID: HRGMv2_0279_5_43
Type: CAZyme
Location: 56499 - 57620 (+)
Gene ID: HRGMv2_0279_5_44
Type: pfam
Location: 57663 - 58835 (+)
Gene ID: HRGMv2_0279_5_45
Type: pfam
Location: 59415 - 60524 (+)
Gene ID: HRGMv2_0279_5_46
Type: TC
Location: 60574 - 62055 (+)
Gene ID: HRGMv2_0279_5_47
Type: TC
Location: 62084 - 62725 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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