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Cluster: HRGMv2_0279_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0279_45 HRGMv2_0279_45_1 83 2638 - GH31_15
CAZyme HRGMv2_0279_45 HRGMv2_0279_45_2 2764 4890 - GH97
CAZyme HRGMv2_0279_45 HRGMv2_0279_45_3 4906 6681 - GH66
pfam HRGMv2_0279_45 HRGMv2_0279_45_4 6708 8213 - SusE | SusF_SusE | SusF_SusE
TC HRGMv2_0279_45 HRGMv2_0279_45_5 8252 9745 - 8.A.46.1.3
TC HRGMv2_0279_45 HRGMv2_0279_45_6 9759 11105 - 1.B.14.6.1
TC HRGMv2_0279_45 HRGMv2_0279_45_7 11112 12761 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0279_45 HRGMv2_0279_45_8 12989 13093 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0279_45 HRGMv2_0279_45_9 13078 14715 + DUF6377
CAZyme HRGMv2_0279_45 HRGMv2_0279_45_10 15504 16643 - GT19
Gene ID: HRGMv2_0279_45_1
Type: CAZyme
Location: 83 - 2638 (-)
Gene ID: HRGMv2_0279_45_2
Type: CAZyme
Location: 2764 - 4890 (-)
Gene ID: HRGMv2_0279_45_3
Type: CAZyme
Location: 4906 - 6681 (-)
Gene ID: HRGMv2_0279_45_4
Type: pfam
Location: 6708 - 8213 (-)
Gene ID: HRGMv2_0279_45_5
Type: TC
Location: 8252 - 9745 (-)
Gene ID: HRGMv2_0279_45_6
Type: TC
Location: 9759 - 11105 (-)
Gene ID: HRGMv2_0279_45_7
Type: TC
Location: 11112 - 12761 (-)
Gene ID: HRGMv2_0279_45_8
Type:
Location: 12989 - 13093 (+)
Gene ID: HRGMv2_0279_45_9
Type: pfam
Location: 13078 - 14715 (+)
Gene ID: HRGMv2_0279_45_10
Type: CAZyme
Location: 15504 - 16643 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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