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Cluster: HRGMv2_0279_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0279_6 HRGMv2_0279_6_19 21480 24047 + GH2
pfam HRGMv2_0279_6 HRGMv2_0279_6_20 24065 24736 - TrmO_N | TrmO_C
TC HRGMv2_0279_6 HRGMv2_0279_6_21 24905 26158 - 9.B.168.1.2
peptidase HRGMv2_0279_6 HRGMv2_0279_6_22 26214 27953 + C26.964
TC HRGMv2_0279_6 HRGMv2_0279_6_23 28192 30090 + 2.A.9.3.1
peptidase HRGMv2_0279_6 HRGMv2_0279_6_24 30189 32357 + S09.UPC
TC HRGMv2_0279_6 HRGMv2_0279_6_25 32571 33986 + 2.A.1.53.5
CAZyme HRGMv2_0279_6 HRGMv2_0279_6_26 34120 36300 - GH36
Gene ID: HRGMv2_0279_6_19
Type: CAZyme
Location: 21480 - 24047 (+)
Gene ID: HRGMv2_0279_6_20
Type: pfam
Location: 24065 - 24736 (-)
Gene ID: HRGMv2_0279_6_21
Type: TC
Location: 24905 - 26158 (-)
Gene ID: HRGMv2_0279_6_22
Type: peptidase
Location: 26214 - 27953 (+)
Gene ID: HRGMv2_0279_6_23
Type: TC
Location: 28192 - 30090 (+)
Gene ID: HRGMv2_0279_6_24
Type: peptidase
Location: 30189 - 32357 (+)
Gene ID: HRGMv2_0279_6_25
Type: TC
Location: 32571 - 33986 (+)
Gene ID: HRGMv2_0279_6_26
Type: CAZyme
Location: 34120 - 36300 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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