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Genome Details

Selected Rep_genome_ID: HRGMv2_0277
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900546575
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
GCF_021626405.1_ASM2162640v1_genomic 3,047,894 94.24% 4.44% NA Africa H3AfricaPhase1
HRGMv2_0277 3,120,015 98.33% 0% UK Europe HRGM
Rep_208 3,151,200 95.5749% 0% NA NA WIS
SW057_62 3,542,342 98.7% 0.12% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0277_CGC11 CGCFAM_00031 Yes 8 3 pectin/galactan
HRGMv2_0277_CGC33 CGCFAM_00034 Yes 8 4
HRGMv2_0277_CGC41 CGCFAM_00043 Yes 5 3 alpha-glucan
HRGMv2_0277_CGC1 CGCFAM_00072 Yes 7 2
HRGMv2_0277_CGC16 CGCFAM_00096 Yes 5 4
HRGMv2_0277_CGC36 CGCFAM_00240 Yes 5 1 fructan
HRGMv2_0277_CGC12 CGCFAM_00254 Yes 4 1
HRGMv2_0277_CGC28 CGCFAM_00495 Yes 4 1
HRGMv2_0277_CGC34 CGCFAM_00521 Yes 10 2
HRGMv2_0277_CGC17 CGCFAM_00604 Yes 16 1
HRGMv2_0277_CGC10 CGCFAM_00776 Yes 11 4
HRGMv2_0277_CGC13 CGCFAM_01162 Yes 6 1
HRGMv2_0277_CGC26 CGCFAM_01356 Yes 9 3
HRGMv2_0277_CGC5 CGCFAM_01645 Yes 9 3
HRGMv2_0277_CGC37 CGCFAM_01828 Yes 3 1
HRGMv2_0277_CGC8 CGCFAM_02013 Yes 9 2
HRGMv2_0277_CGC42 CGCFAM_02015 Yes 7 1
HRGMv2_0277_CGC7 CGCFAM_02523 Yes 3 1
HRGMv2_0277_CGC2 CGCFAM_02623 Yes 3 1
HRGMv2_0277_CGC20 CGCFAM_03251 Yes 3 1
HRGMv2_0277_CGC21 CGCFAM_03585 Yes 15 4
HRGMv2_0277_CGC31 CGCFAM_04694 Yes 4 1
HRGMv2_0277_CGC18 CGCFAM_04697 Yes 5 1
HRGMv2_0277_CGC38 CGCFAM_05960 Yes 3 1
HRGMv2_0277_CGC43 CGCFAM_07227 Yes 3 1
Top CAZyme Families