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Cluster: HRGMv2_0277_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0277_9 HRGMv2_0277_9_3 3112 4782 - 8.A.46.1.6
TC HRGMv2_0277_9 HRGMv2_0277_9_4 4798 7698 - 1.B.14.6.1
TF HRGMv2_0277_9 HRGMv2_0277_9_5 8506 9306 - KilA-N
CAZyme HRGMv2_0277_9 HRGMv2_0277_9_6 9408 11633 - GH36
pfam HRGMv2_0277_9 HRGMv2_0277_9_7 12316 13674 - AAA_14 | DUF4143
NULL(UNKNOWN) HRGMv2_0277_9 HRGMv2_0277_9_8 13946 14164 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0277_9 HRGMv2_0277_9_9 14169 15599 - 2.A.21.3.7
pfam HRGMv2_0277_9 HRGMv2_0277_9_10 15725 17209 + Metallophos | MetallophosC | MetallophosN
CAZyme HRGMv2_0277_9 HRGMv2_0277_9_11 17321 18697 + PL8_3
Gene ID: HRGMv2_0277_9_3
Type: TC
Location: 3112 - 4782 (-)
Gene ID: HRGMv2_0277_9_4
Type: TC
Location: 4798 - 7698 (-)
Gene ID: HRGMv2_0277_9_5
Type: TF
Location: 8506 - 9306 (-)
Gene ID: HRGMv2_0277_9_6
Type: CAZyme
Location: 9408 - 11633 (-)
Gene ID: HRGMv2_0277_9_7
Type: pfam
Location: 12316 - 13674 (-)
Gene ID: HRGMv2_0277_9_8
Type:
Location: 13946 - 14164 (-)
Gene ID: HRGMv2_0277_9_9
Type: TC
Location: 14169 - 15599 (-)
Gene ID: HRGMv2_0277_9_10
Type: pfam
Location: 15725 - 17209 (+)
Gene ID: HRGMv2_0277_9_11
Type: CAZyme
Location: 17321 - 18697 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0277_9_7 vegetarian > omnivore 4.50492 0.02377
HRGMv2_0277_9_7 vegetarian > vegan 2.02462 0.03383

🧭 Explore Read Mapping of CGC

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