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Cluster: HRGMv2_0277_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0277_22 HRGMv2_0277_22_16 13769 14065 + 8.A.58.2.7
pfam HRGMv2_0277_22 HRGMv2_0277_22_17 14037 14432 + DUF2752
pfam HRGMv2_0277_22 HRGMv2_0277_22_18 14467 14799 + TM2
CAZyme HRGMv2_0277_22 HRGMv2_0277_22_19 14810 15868 + CBM9
pfam HRGMv2_0277_22 HRGMv2_0277_22_20 16198 17466 - N-glycanase_N | N-glycanase_C
CAZyme HRGMv2_0277_22 HRGMv2_0277_22_21 17543 18892 - GH29
CAZyme HRGMv2_0277_22 HRGMv2_0277_22_22 19069 20454 - GH29
pfam HRGMv2_0277_22 HRGMv2_0277_22_23 20543 22294 - SusD-like | SusD-like_2
TC HRGMv2_0277_22 HRGMv2_0277_22_24 22337 25783 - 1.B.14.6.2
NULL(UNKNOWN) HRGMv2_0277_22 HRGMv2_0277_22_25 26178 27281 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0277_22 HRGMv2_0277_22_26 27489 28259 - Pro_isomerase
CAZyme HRGMv2_0277_22 HRGMv2_0277_22_27 28503 30515 - GH20
pfam HRGMv2_0277_22 HRGMv2_0277_22_28 30711 31202 + DUF4494
pfam HRGMv2_0277_22 HRGMv2_0277_22_29 31249 31926 + Ala_racemase_N
TC HRGMv2_0277_22 HRGMv2_0277_22_30 31992 34064 - 3.A.7.7.1
Gene ID: HRGMv2_0277_22_16
Type: TC
Location: 13769 - 14065 (+)
Gene ID: HRGMv2_0277_22_17
Type: pfam
Location: 14037 - 14432 (+)
Gene ID: HRGMv2_0277_22_18
Type: pfam
Location: 14467 - 14799 (+)
Gene ID: HRGMv2_0277_22_19
Type: CAZyme
Location: 14810 - 15868 (+)
Gene ID: HRGMv2_0277_22_20
Type: pfam
Location: 16198 - 17466 (-)
Gene ID: HRGMv2_0277_22_21
Type: CAZyme
Location: 17543 - 18892 (-)
Gene ID: HRGMv2_0277_22_22
Type: CAZyme
Location: 19069 - 20454 (-)
Gene ID: HRGMv2_0277_22_23
Type: pfam
Location: 20543 - 22294 (-)
Gene ID: HRGMv2_0277_22_24
Type: TC
Location: 22337 - 25783 (-)
Gene ID: HRGMv2_0277_22_25
Type:
Location: 26178 - 27281 (+)
Gene ID: HRGMv2_0277_22_26
Type: pfam
Location: 27489 - 28259 (-)
Gene ID: HRGMv2_0277_22_27
Type: CAZyme
Location: 28503 - 30515 (-)
Gene ID: HRGMv2_0277_22_28
Type: pfam
Location: 30711 - 31202 (+)
Gene ID: HRGMv2_0277_22_29
Type: pfam
Location: 31249 - 31926 (+)
Gene ID: HRGMv2_0277_22_30
Type: TC
Location: 31992 - 34064 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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