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Cluster: HRGMv2_0277_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0277_7 HRGMv2_0277_7_2 729 4799 - CBM32 | GH2
TC HRGMv2_0277_7 HRGMv2_0277_7_3 4904 5671 - 3.A.1.147.9
pfam HRGMv2_0277_7 HRGMv2_0277_7_4 5753 8590 - UvrA_DNA-bind | UvrA_inter
sulfatase HRGMv2_0277_7 HRGMv2_0277_7_5 8654 9364 - S1_4
CAZyme HRGMv2_0277_7 HRGMv2_0277_7_6 9495 10871 + CBM50
pfam HRGMv2_0277_7 HRGMv2_0277_7_7 10889 11656 + OMP_b-brl_2
TC HRGMv2_0277_7 HRGMv2_0277_7_8 11700 13226 + 2.A.17.1.6
TC HRGMv2_0277_7 HRGMv2_0277_7_9 13441 15738 + 9.B.14.3.1
CAZyme HRGMv2_0277_7 HRGMv2_0277_7_10 16044 17891 + GH29
Gene ID: HRGMv2_0277_7_2
Type: CAZyme
Location: 729 - 4799 (-)
Gene ID: HRGMv2_0277_7_3
Type: TC
Location: 4904 - 5671 (-)
Gene ID: HRGMv2_0277_7_4
Type: pfam
Location: 5753 - 8590 (-)
Gene ID: HRGMv2_0277_7_5
Type: sulfatase
Location: 8654 - 9364 (-)
Gene ID: HRGMv2_0277_7_6
Type: CAZyme
Location: 9495 - 10871 (+)
Gene ID: HRGMv2_0277_7_7
Type: pfam
Location: 10889 - 11656 (+)
Gene ID: HRGMv2_0277_7_8
Type: TC
Location: 11700 - 13226 (+)
Gene ID: HRGMv2_0277_7_9
Type: TC
Location: 13441 - 15738 (+)
Gene ID: HRGMv2_0277_7_10
Type: CAZyme
Location: 16044 - 17891 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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