dbCAN Logo

Cluster: HRGMv2_0277_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0277_58 HRGMv2_0277_58_1 40 2220 + GH36
pfam HRGMv2_0277_58 HRGMv2_0277_58_2 2404 3351 + PDDEXK_2
TC HRGMv2_0277_58 HRGMv2_0277_58_3 3459 4874 - 2.A.1.53.5
peptidase HRGMv2_0277_58 HRGMv2_0277_58_4 5085 7253 - S09.UPC
TC HRGMv2_0277_58 HRGMv2_0277_58_5 7455 9353 - 2.A.9.3.1
peptidase HRGMv2_0277_58 HRGMv2_0277_58_6 9715 11331 - C26.964
NULL(UNKNOWN) HRGMv2_0277_58 HRGMv2_0277_58_7 11324 11458 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0277_58 HRGMv2_0277_58_8 11484 12767 + 9.B.168.1.2
pfam HRGMv2_0277_58 HRGMv2_0277_58_9 12936 13610 + TrmO_N | TrmO_C
CAZyme HRGMv2_0277_58 HRGMv2_0277_58_10 13628 16192 - GH2
Gene ID: HRGMv2_0277_58_1
Type: CAZyme
Location: 40 - 2220 (+)
Gene ID: HRGMv2_0277_58_2
Type: pfam
Location: 2404 - 3351 (+)
Gene ID: HRGMv2_0277_58_3
Type: TC
Location: 3459 - 4874 (-)
Gene ID: HRGMv2_0277_58_4
Type: peptidase
Location: 5085 - 7253 (-)
Gene ID: HRGMv2_0277_58_5
Type: TC
Location: 7455 - 9353 (-)
Gene ID: HRGMv2_0277_58_6
Type: peptidase
Location: 9715 - 11331 (-)
Gene ID: HRGMv2_0277_58_7
Type:
Location: 11324 - 11458 (-)
Gene ID: HRGMv2_0277_58_8
Type: TC
Location: 11484 - 12767 (+)
Gene ID: HRGMv2_0277_58_9
Type: pfam
Location: 12936 - 13610 (+)
Gene ID: HRGMv2_0277_58_10
Type: CAZyme
Location: 13628 - 16192 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List