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Cluster: HRGMv2_0277_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0277_17 HRGMv2_0277_17_37 36011 36994 - GH179
STP HRGMv2_0277_17 HRGMv2_0277_17_38 37151 37930 - NUDIX
TC HRGMv2_0277_17 HRGMv2_0277_17_39 38137 39510 + 2.A.62.1.3
pfam HRGMv2_0277_17 HRGMv2_0277_17_40 39566 40543 + PFK
TC HRGMv2_0277_17 HRGMv2_0277_17_41 40674 42200 + 3.A.2.1.2
pfam HRGMv2_0277_17 HRGMv2_0277_17_42 42230 42472 + ATP-synt_DE_N
NULL(UNKNOWN) HRGMv2_0277_17 HRGMv2_0277_17_43 42488 42916 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0277_17 HRGMv2_0277_17_44 42923 43978 + 3.A.2.1.7
TC HRGMv2_0277_17 HRGMv2_0277_17_45 44027 44269 + 3.A.2.1.6
pfam HRGMv2_0277_17 HRGMv2_0277_17_46 44321 44839 + ATP-synt_B | YMF19
pfam HRGMv2_0277_17 HRGMv2_0277_17_47 44849 45382 + OSCP
TC HRGMv2_0277_17 HRGMv2_0277_17_48 45430 46989 + 3.A.2.1.3
TC HRGMv2_0277_17 HRGMv2_0277_17_49 46996 47970 + 3.A.2.1.1
NULL(UNKNOWN) HRGMv2_0277_17 HRGMv2_0277_17_50 48067 48201 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0277_17 HRGMv2_0277_17_51 48248 48613 + 1.E.14.1.13
TC HRGMv2_0277_17 HRGMv2_0277_17_52 48755 49447 + 2.A.122.1.5
Gene ID: HRGMv2_0277_17_37
Type: CAZyme
Location: 36011 - 36994 (-)
Gene ID: HRGMv2_0277_17_38
Type: STP
Location: 37151 - 37930 (-)
Gene ID: HRGMv2_0277_17_39
Type: TC
Location: 38137 - 39510 (+)
Gene ID: HRGMv2_0277_17_40
Type: pfam
Location: 39566 - 40543 (+)
Gene ID: HRGMv2_0277_17_41
Type: TC
Location: 40674 - 42200 (+)
Gene ID: HRGMv2_0277_17_42
Type: pfam
Location: 42230 - 42472 (+)
Gene ID: HRGMv2_0277_17_43
Type:
Location: 42488 - 42916 (+)
Gene ID: HRGMv2_0277_17_44
Type: TC
Location: 42923 - 43978 (+)
Gene ID: HRGMv2_0277_17_45
Type: TC
Location: 44027 - 44269 (+)
Gene ID: HRGMv2_0277_17_46
Type: pfam
Location: 44321 - 44839 (+)
Gene ID: HRGMv2_0277_17_47
Type: pfam
Location: 44849 - 45382 (+)
Gene ID: HRGMv2_0277_17_48
Type: TC
Location: 45430 - 46989 (+)
Gene ID: HRGMv2_0277_17_49
Type: TC
Location: 46996 - 47970 (+)
Gene ID: HRGMv2_0277_17_50
Type:
Location: 48067 - 48201 (-)
Gene ID: HRGMv2_0277_17_51
Type: TC
Location: 48248 - 48613 (+)
Gene ID: HRGMv2_0277_17_52
Type: TC
Location: 48755 - 49447 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0277_17_45 vegetarian > omnivore 1.10749 0.02377

🧭 Explore Read Mapping of CGC

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