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Cluster: HRGMv2_0277_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0277_86 HRGMv2_0277_86_1 38 1183 + 1.B.14.6.13
TC HRGMv2_0277_86 HRGMv2_0277_86_2 1228 2835 + 8.A.46.2.2
CAZyme HRGMv2_0277_86 HRGMv2_0277_86_3 2888 4009 + GH18
pfam HRGMv2_0277_86 HRGMv2_0277_86_4 4052 5224 + BT_3987-like_N | Laminin_G_3
pfam HRGMv2_0277_86 HRGMv2_0277_86_5 6063 7172 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369
TC HRGMv2_0277_86 HRGMv2_0277_86_6 7997 9361 + 2.A.66.1.32
TC HRGMv2_0277_86 HRGMv2_0277_86_7 9390 10028 + 2.A.115.2.14
Gene ID: HRGMv2_0277_86_1
Type: TC
Location: 38 - 1183 (+)
Gene ID: HRGMv2_0277_86_2
Type: TC
Location: 1228 - 2835 (+)
Gene ID: HRGMv2_0277_86_3
Type: CAZyme
Location: 2888 - 4009 (+)
Gene ID: HRGMv2_0277_86_4
Type: pfam
Location: 4052 - 5224 (+)
Gene ID: HRGMv2_0277_86_5
Type: pfam
Location: 6063 - 7172 (+)
Gene ID: HRGMv2_0277_86_6
Type: TC
Location: 7997 - 9361 (+)
Gene ID: HRGMv2_0277_86_7
Type: TC
Location: 9390 - 10028 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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