dbCAN Logo

Cluster: HRGMv2_0277_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0277_11 HRGMv2_0277_11_40 42450 44588 - GH13_38
pfam HRGMv2_0277_11 HRGMv2_0277_11_41 44595 45482 - Acyl_transf_1
CAZyme HRGMv2_0277_11 HRGMv2_0277_11_42 45699 46628 + GH73
pfam HRGMv2_0277_11 HRGMv2_0277_11_43 46690 49098 - UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
CAZyme HRGMv2_0277_11 HRGMv2_0277_11_44 49301 50044 - GT51
TC HRGMv2_0277_11 HRGMv2_0277_11_45 50125 50799 - 9.B.186.1.3
NULL(UNKNOWN) HRGMv2_0277_11 HRGMv2_0277_11_46 50834 50944 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0277_11 HRGMv2_0277_11_47 51005 52486 + tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC HRGMv2_0277_11 HRGMv2_0277_11_48 52600 54297 + 2.A.81.1.2
NULL(UNKNOWN) HRGMv2_0277_11 HRGMv2_0277_11_49 54470 54628 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0277_11 HRGMv2_0277_11_50 54639 56849 - GH92
Gene ID: HRGMv2_0277_11_40
Type: CAZyme
Location: 42450 - 44588 (-)
Gene ID: HRGMv2_0277_11_41
Type: pfam
Location: 44595 - 45482 (-)
Gene ID: HRGMv2_0277_11_42
Type: CAZyme
Location: 45699 - 46628 (+)
Gene ID: HRGMv2_0277_11_43
Type: pfam
Location: 46690 - 49098 (-)
Gene ID: HRGMv2_0277_11_44
Type: CAZyme
Location: 49301 - 50044 (-)
Gene ID: HRGMv2_0277_11_45
Type: TC
Location: 50125 - 50799 (-)
Gene ID: HRGMv2_0277_11_46
Type:
Location: 50834 - 50944 (+)
Gene ID: HRGMv2_0277_11_47
Type: pfam
Location: 51005 - 52486 (+)
Gene ID: HRGMv2_0277_11_48
Type: TC
Location: 52600 - 54297 (+)
Gene ID: HRGMv2_0277_11_49
Type:
Location: 54470 - 54628 (-)
Gene ID: HRGMv2_0277_11_50
Type: CAZyme
Location: 54639 - 56849 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List