Genome Details
Selected Rep_genome_ID: HRGMv2_0258
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides goldsteinii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A137.bin_29 | 6,288,353 | 94.83% | 0.38% | China(Inner Mongolia) | Asia | IMGG |
| AG467_bin.92 | 6,410,152 | 99.23% | 1.37% | NA | Africa | H3AfricaPhase2 |
| CGMR077825 | 6,279,939 | 97.95% | 0% | China | Asia | CGMR |
| CGMR091126 | 6,552,544 | 96.92% | 0.19% | China | Asia | CGMR |
| HRGMv2_0258 | 6,367,659 | 99.61% | 0.128% | UK | Europe | HRGM |
| Rep_557 | 6,411,182 | 98.0769% | 1.05581% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0258_CGC12 | CGCFAM_02468 | Yes | 5 | 2 | |
| HRGMv2_0258_CGC75 | CGCFAM_02537 | Yes | 17 | 13 | |
| HRGMv2_0258_CGC100 | CGCFAM_02539 | Yes | 4 | 2 | |
| HRGMv2_0258_CGC81 | CGCFAM_02540 | Yes | 8 | 1 | |
| HRGMv2_0258_CGC113 | CGCFAM_02543 | Yes | 13 | 6 | |
| HRGMv2_0258_CGC116 | CGCFAM_02931 | Yes | 6 | 3 | |
| HRGMv2_0258_CGC10 | CGCFAM_03312 | Yes | 3 | 1 | |
| HRGMv2_0258_CGC65 | CGCFAM_03316 | Yes | 4 | 2 | |
| HRGMv2_0258_CGC39 | CGCFAM_03322 | Yes | 3 | 1 | |
| HRGMv2_0258_CGC69 | CGCFAM_03776 | Yes | 7 | 1 | |
| HRGMv2_0258_CGC77 | CGCFAM_03777 | Yes | 7 | 1 | |
| HRGMv2_0258_CGC106 | CGCFAM_04733 | Yes | 9 | 3 | |
| HRGMv2_0258_CGC120 | CGCFAM_04744 | Yes | 8 | 1 | |
| HRGMv2_0258_CGC64 | CGCFAM_04760 | Yes | 3 | 1 | |
| HRGMv2_0258_CGC105 | CGCFAM_05475 | Yes | 3 | 2 | |
| HRGMv2_0258_CGC88 | CGCFAM_06480 | Yes | 12 | 7 | |
| HRGMv2_0258_CGC95 | CGCFAM_06500 | Yes | 7 | 2 | |
| HRGMv2_0258_CGC32 | CGCFAM_07220 | Yes | 6 | 2 | |
| HRGMv2_0258_CGC89 | CGCFAM_08452 | Yes | 4 | 1 | |
| HRGMv2_0258_CGC115 | CGCFAM_08454 | Yes | 9 | 3 | |
| HRGMv2_0258_CGC55 | CGCFAM_08892 | Yes | 21 | 10 | |
| HRGMv2_0258_CGC57 | CGCFAM_08893 | Yes | 5 | 1 |
Top CAZyme Families