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Cluster: HRGMv2_0258_CGC115

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0258_37 HRGMv2_0258_37_19 26105 29947 - PL33_2 | PL35
pfam HRGMv2_0258_37 HRGMv2_0258_37_20 29954 30553 - Fasciclin
TC HRGMv2_0258_37 HRGMv2_0258_37_21 30566 32023 - 8.A.46.1.4
TC HRGMv2_0258_37 HRGMv2_0258_37_22 32036 35113 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0258_37 HRGMv2_0258_37_23 35135 35854 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0258_37 HRGMv2_0258_37_24 35863 36960 - GH105
pfam HRGMv2_0258_37 HRGMv2_0258_37_25 37184 38281 + Porin_O_P | Porin_O_P
CAZyme HRGMv2_0258_37 HRGMv2_0258_37_26 38278 40743 - GH95
TC HRGMv2_0258_37 HRGMv2_0258_37_27 40777 42624 - 3.A.1.135.5
Gene ID: HRGMv2_0258_37_19
Type: CAZyme
Location: 26105 - 29947 (-)
Gene ID: HRGMv2_0258_37_20
Type: pfam
Location: 29954 - 30553 (-)
Gene ID: HRGMv2_0258_37_21
Type: TC
Location: 30566 - 32023 (-)
Gene ID: HRGMv2_0258_37_22
Type: TC
Location: 32036 - 35113 (-)
Gene ID: HRGMv2_0258_37_23
Type:
Location: 35135 - 35854 (-)
Gene ID: HRGMv2_0258_37_24
Type: CAZyme
Location: 35863 - 36960 (-)
Gene ID: HRGMv2_0258_37_25
Type: pfam
Location: 37184 - 38281 (+)
Gene ID: HRGMv2_0258_37_26
Type: CAZyme
Location: 38278 - 40743 (-)
Gene ID: HRGMv2_0258_37_27
Type: TC
Location: 40777 - 42624 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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