dbCAN Logo

Cluster: HRGMv2_0258_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0258_21 HRGMv2_0258_21_4 1328 3586 - GH92
STP HRGMv2_0258_21 HRGMv2_0258_21_5 3752 4006 + Sigma70_r2
NULL(UNKNOWN) HRGMv2_0258_21 HRGMv2_0258_21_6 4025 4345 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0258_21 HRGMv2_0258_21_7 4426 4704 + 2.A.124.1.2
TC HRGMv2_0258_21 HRGMv2_0258_21_8 4701 5327 + 2.A.124.1.4
NULL(UNKNOWN) HRGMv2_0258_21 HRGMv2_0258_21_9 5353 5949 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0258_21 HRGMv2_0258_21_10 6066 9356 - S41.UPB
TC HRGMv2_0258_21 HRGMv2_0258_21_11 10311 13700 + 1.B.14.6.1
Gene ID: HRGMv2_0258_21_4
Type: CAZyme
Location: 1328 - 3586 (-)
Gene ID: HRGMv2_0258_21_5
Type: STP
Location: 3752 - 4006 (+)
Gene ID: HRGMv2_0258_21_6
Type:
Location: 4025 - 4345 (+)
Gene ID: HRGMv2_0258_21_7
Type: TC
Location: 4426 - 4704 (+)
Gene ID: HRGMv2_0258_21_8
Type: TC
Location: 4701 - 5327 (+)
Gene ID: HRGMv2_0258_21_9
Type:
Location: 5353 - 5949 (+)
Gene ID: HRGMv2_0258_21_10
Type: peptidase
Location: 6066 - 9356 (-)
Gene ID: HRGMv2_0258_21_11
Type: TC
Location: 10311 - 13700 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0258_21_8 vegetarian > omnivore 1.10655 0.01449

🧭 Explore Read Mapping of CGC

← Back to Cluster List