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Cluster: HRGMv2_0258_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0258_6 HRGMv2_0258_6_138 189885 193223 + 1.B.14.6.1
TC HRGMv2_0258_6 HRGMv2_0258_6_139 193230 194861 + 8.A.46.1.3
CAZyme HRGMv2_0258_6 HRGMv2_0258_6_140 194927 197470 + GH116
NULL(UNKNOWN) HRGMv2_0258_6 HRGMv2_0258_6_141 197475 198062 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0258_6 HRGMv2_0258_6_142 198201 201809 + GH106
TC HRGMv2_0258_6 HRGMv2_0258_6_143 201904 203463 - 2.A.3.7.1
Gene ID: HRGMv2_0258_6_138
Type: TC
Location: 189885 - 193223 (+)
Gene ID: HRGMv2_0258_6_139
Type: TC
Location: 193230 - 194861 (+)
Gene ID: HRGMv2_0258_6_140
Type: CAZyme
Location: 194927 - 197470 (+)
Gene ID: HRGMv2_0258_6_141
Type:
Location: 197475 - 198062 (+)
Gene ID: HRGMv2_0258_6_142
Type: CAZyme
Location: 198201 - 201809 (+)
Gene ID: HRGMv2_0258_6_143
Type: TC
Location: 201904 - 203463 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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