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Cluster: HRGMv2_0258_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0258_17 HRGMv2_0258_17_67 76532 77731 + 2.A.1.46.5
CAZyme HRGMv2_0258_17 HRGMv2_0258_17_68 77739 78980 - GT1
NULL(UNKNOWN) HRGMv2_0258_17 HRGMv2_0258_17_69 79017 79190 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0258_17 HRGMv2_0258_17_70 79394 80572 + DUF4925
TC HRGMv2_0258_17 HRGMv2_0258_17_71 80591 83404 + 1.B.14.10.2
pfam HRGMv2_0258_17 HRGMv2_0258_17_72 83483 84046 - Formyl_trans_N
TC HRGMv2_0258_17 HRGMv2_0258_17_73 84201 84437 + 3.D.1.6.3
Gene ID: HRGMv2_0258_17_67
Type: TC
Location: 76532 - 77731 (+)
Gene ID: HRGMv2_0258_17_68
Type: CAZyme
Location: 77739 - 78980 (-)
Gene ID: HRGMv2_0258_17_69
Type:
Location: 79017 - 79190 (-)
Gene ID: HRGMv2_0258_17_70
Type: pfam
Location: 79394 - 80572 (+)
Gene ID: HRGMv2_0258_17_71
Type: TC
Location: 80591 - 83404 (+)
Gene ID: HRGMv2_0258_17_72
Type: pfam
Location: 83483 - 84046 (-)
Gene ID: HRGMv2_0258_17_73
Type: TC
Location: 84201 - 84437 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0258_17_69 vegetarian > omnivore 2.39810 0.01449
HRGMv2_0258_17_69 vegetarian > vegan 1.20871 0.01710

🧭 Explore Read Mapping of CGC

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